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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8ie2F_

Fold library idPDB HeaderMoleculeTitle
c8ie2F_3.60PDB header: transferase,ligaseChain: F: PDB Molecule: glycine--trna ligase beta subunit;


Added to library: Sat Jun 10 08:55:40 2023
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQKTAAEV
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Known secondary structure (DSSP)

S


GGGTT


STT
SB

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTGGIKDVITKMNFPTMMKWSTYSFKYIRPIRWIVSLLDDEVVPVQILDVAAGRVSRGHRFLGHDVEIAT
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Known secondary structure (DSSP) T


S


SS


SS
TT




SS

S

TTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence AADYEADLASVQVVADAAKRKATIREQIAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTI
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Known secondary structure (DSSP) TTTTT



TT



TT
SS


GGGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDEVLITSMRDHQRFFYVTDAEDNLLPHFVSVRNGNTDHLENVALGNQKVLTARLEDAAFFYHEDQQHSI
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Known secondary structure (DSSP)
TT


TT

SS
SSSTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QEYVERLKKVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHRAAQIYKFDLVTGMVGEFPELQ
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Known secondary structure (DSSP) TTTSTTTT

TTGGGS

GGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFA
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Known secondary structure (DSSP) TTT

TT


SSS



SSTT



SS

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRRQAFGIVRIVREQGWDFPIRQLEADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYD
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Known secondary structure (DSSP)



BSSSS
GGG
SSTTTTTTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence IVDTVIKGSRQDIREMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLTVDPSLFENEAEQH
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Known secondary structure (DSSP) T
SS
BGGG
TTTT

S
TT




GGG
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIAQMINVMGDLN
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Known secondary structure (DSSP)

TT

TT

SS
SSTTT

GG
 .....
Sequence QLIVK
Predicted secondary structure

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Known secondary structure (DSSP) G




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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