Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8hghB_

Fold library idPDB HeaderMoleculeTitle
c8hghB_4.16PDB header: hydrolaseChain: B: PDB Molecule: maltose/maltodextrin-binding periplasmic protein,


Added to library: Sat Jan 14 09:42:29 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSRALYFSGRGEQLRLRADLELPRDAFTLQVWLRAEGGQRSPAVITGLYDKCSYISRDRGWVVGIHTISD
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


TTS


TTS



S

S


SS
SS
SS



S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QDNKDPRYFFSLKTDRARQVTTINAHRSYLPGQWVYLAATYDGQFMKLYVNGAQVATSGEQVGGIFSPLT
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TTT


SS
SS


SS


TTS
SS
TT



S
SS
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence QKCKVLMLGGSALNHNYRGYIEHFSLWKVARTQREILSDMETHGAHTALPQLLLQENWDNVKHAWSPMKD
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) TTTS

TT





SS


TT




SSTT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSSPKVEFSNAHGFLLDTSLEPPLCGQTLCDNTEVIASYNQLSSFRQPKVVRYRVVNLYEDDHKNPTVTR
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) S




TTS
SS






TT

SGGGST
STT



TTS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EQVDFQHHQLAEAFKQYNISWELDVLEVSNSSLRRRLILANCDISKIGDENCDPECNHTLTGHDGGDCRH
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) GGGT
SSSS

SSSS

TTS

TTTTSST
 .........360.........370.........380.........390.........400.........410.........420
Sequence LRDMDCNYEDGGECCDPEITNVTQTCFDPDSPHRAYLDVNELKNILKLDGSTHLNIFFAKSSEEELAGVA
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) T


SS




STTTSTTTS



TT
SS
S



SSS



SS
SS



 .........430.........440.........450.........460.........470.........480.........490
Sequence TWPWDKEALMHLGGIVLNPSFYGMPGHTHTMIHEIGHSLGLYHVFRGISEIQSCSDPCMETEPSFETGDL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

TTSTTSSSTT
S
TTTTT
TTS
TTTT


TTTTTTT
S
TT
S


SS

SSSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence CNDTNPAPKHKSCGDPGPGNDTCGFHSFFNTPYNNFMSYADDDCTDSFTPNQVARMHCYLDLVYQGWQPS
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)
SSS






SSSS



SSSSS
S


S

TTSTTSS

TTT




TTST
TTTS

 .........570.........580.........590.........600.........610.........620.........630
Sequence RKPAPVALAPQVLGHTTDSVTLEWFPPIDGHFFERELGSACHLCLEGRILVQYASNASSPMPCSPSGHWS
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)






S


SS




TT


B


SSSSTTTTTTB

SSSSS

B
 .........640.........650.........660.........670.........680.........690.........700
Sequence PREAEGHPDVEQPCKSSVRTWSPNSAVNPHTVPPACPEPQGCYLELEFLYPLVPESLTIWVTFVSTDWDS
Predicted secondary structure




















































SS confidence





































































Known secondary structure (DSSP)

TTSSS


SSSSS

SSSB
TTSSS
TTS





SSS



S

SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence SGAVNDIKLLAVSGKNISLGPQNVFCDVPLTIRLWDVGEEVYGIQIYTLDEHLEIDAAMLTSTADTPLCL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) S
S

TT




B


SSS


S

S


SS

SS
SSST
 .........780.........790.........800.........810.........820.........830.........840
Sequence QCKPLKYKVVRDPPLQMDVASILHLNRKFVDMDLNLGSVYQYWVITISGTEESEPSPAVTYIHGSGYCGD
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) T

B
SS


SS
BSSS



SS
SSS







SSS

TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence GIIQKDQGEQCDDMNKINGDGCSLFCRQEVSFNCIDEPSRCYFHDGDGVCEEFEQKTSIKDCGVYTPQGF
Predicted secondary structure





























































SS confidence





































































Known secondary structure (DSSP) S


GGGT
S


S


TTSSB
TTS
B
TT

SSS



SSSS


STTTTT
TTTS




TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LDQWASNASVSHQDQQCPGWVIIGQPAASQVCRTKVIDLSEGISQHAWYPCTISYPYSQLAQTTFWLRAY
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP)

S
SS

SSS
S
TTSS


TT



SS




STTTTT
B


SS



 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence FSQPMVAAAVIVHLVTDGTYYGDQKQETISVQLLDTKDQSHDLGLHVLSCRNNPLIIPVVHDLSQPFYHS
Predicted secondary structure
































































SS confidence





































































Known secondary structure (DSSP)

SS




SS






TTS







STTS



SSS



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QAVRVSFSSPLVAISGVALRSFDNFDPVTLSSDCPELAVENASLNCSSSDRYHGAQCTVSCRTGYVLQIR
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP)
STT


SS

TTTS








TT





S
STT

TT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RDDELIKSQTGPSVTVTCTEGKWNKQVACEPVDCSIPDHHQVYAASFSCPEGTTFGSQCSFQCRHPAQLK
Predicted secondary structure



























































SS confidence





































































Known secondary structure (DSSP) SS
S





STTS
B



SSSSSSS
SS
SBTT

SSB

B
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence GNNSLLTCMEDGLWSFPEALCELMCLAPPPVPNADLQTARCRENKHKVGSFCKYKCKPGYHVPGSSRKSK
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)
S

B
TTSSB


SSB

B





TT
SGGGGSS
TT

TT
TT

SSS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KRAFKTQCTQDGSWQEGACVPVTCDPPPPKFHGLYQCTNGFQFNSECRIKLGSNVIHCRKDGTWNGSFHV
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP)

B
SSSSB











TTS
SS

BSSTTSSS
BB





SS
B

TT


S




 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence NSNLKLQCPDGYAIGSECATSCLDHNSESIILPMNVTVRDIPHWLNPTRVERVVCTAGLKWYPHPALIHC
Predicted secondary structure
































































SS confidence





































































Known secondary structure (DSSP)

S
SSTTSSS


SSTT
TTT

STT

TT


B







SSS

SS
TTT
 .........1410.........1420.........1430.........1440.........1450.........1460..
Sequence VKGCEPFMGDNYCDAINNRAFCNYDGGDCCTSTVKTKKVTPFPMSCDLQGDCACRDPQAQEH
Predicted secondary structure


















































SS confidence





























































Known secondary structure (DSSP)


S
TTSS


STT
SGGGTTSGGG
TTSS


SSTTS
TTTTTS


TTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D