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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8hdsG_

Fold library idPDB HeaderMoleculeTitle
c8hdsG_3.57PDB header: viral proteinChain: G: PDB Molecule: pam3 portal protein;


Added to library: Sat Jan 21 12:46:23 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLRSMISGLGDPLRDKNASTFHWDRQLDDRQLLYAYRNSWVARKAVTIPALDAVRKWRDWQADQKDISRI
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Known secondary structure (DSSP)



SSTTSS
TTT

SSTT







SS
TTSSS




SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EATEKRLGLQQKLLQCKTLARLWGGAAIVIGVKDQDMATPFEPETVNKDDLVYLTVMSRRELSPEELEQD
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Known secondary structure (DSSP) TSS
SS

SSSS

TTS

SS


GGG








 .........150.........160.........170.........180.........190.........200.........210
Sequence PLDEFYARPKRYQVSNGRNLSFVHPSRIVHQVGETHPDPMLATGVNVGWGDSTLQALYDAMMNSDNTQAN
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Known secondary structure (DSSP) TTSTTTTS
S


SSS



GGGSB

SSTTT

SS
SSS
B
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IASLVFEANVDVIGLPDFMENMSSEVYRQKLLDRFTLAAAGKGINKTLMLDAEEVFTAHSRSFANLDKIM
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Known secondary structure (DSSP) TTTTTTS


TT
TTGGGSSS
SSS





SS





SSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EQFILFVAGAADIPLTRFLGQSPAGMSSTGQHDMKNYHDRIQSIQTLDLQPSMYRLDEAIIRSSLGARPE
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Known secondary structure (DSSP) TT

TTTTTSS
S





TTSSSTTTTTSTTTTSSSSSSTTTTTTT


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ELFYIWSPLEQMSEKERAEIGKLHAETVNVIAGTGLFMQEELREVFGNQLVETGLYPGLGDLLAQNGNEL
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Known secondary structure (DSSP) S





S


TTSSSS
TTTTTSS




TTTSSSS

 .........430.........440..
Sequence PEWDLEQRSAEASTKTAEAAAL
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Known secondary structure (DSSP) TTTTSSTTTTTSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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