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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8hd4A_

Fold library idPDB HeaderMoleculeTitle
c8hd4A_2.68PDB header: biosynthetic proteinChain: A: PDB Molecule: long-chain-fatty-acid--amp ligase fadd23;


Added to library: Sat Feb 18 16:42:45 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSIPSMLRQCVNLHPDGTAFTYIDYERDSEGISESLTWSQVYRRTLNVAAEVRRHAAIGDRAVILAPQGL
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Known secondary structure (DSSP)


TTS
SSSTT
TT

TT


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DYIVAFLGALQAGLIAVPLSAPDERVDAVVRDAKPNVVLTTSAISPPTVAVDQLDLDSPIDSLQTTAYLQ
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Known secondary structure (DSSP) TT






S
TT



GGGS
TT





SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YTPAGVMITYKNILANFQQMISAYFADTGAVPPLDLFIMSWLPFYHDMGLVLGVCAPIIVGCGAVLTSPV
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Known secondary structure (DSSP)




TGGGTT


TT
S
TTSTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence AFLQRPARWLQLMAREGQAFSAAPNFAFELTAAKAIDDDLAGLDLGRIKTILCGSERVHPATLKRFVDRF
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Known secondary structure (DSSP)
TTSSS
S

TTTTTT


TT


SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence SRFNLREFAIRPAYGLAEATVYVATSQAGQPPEIRYFEPHELSAGQAKPCATGAGTALVSYPLPQSPIVR
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Known secondary structure (DSSP) GGGT

GGG

GGGTT



TTS



TB

B

TTSS


SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IVDPNTNTECPPGTIGEIWVHGDNVAGGYWEKPDETERTFGGALVAPSAGTPVGPWLRTGDSGFVSEDKF
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Known secondary structure (DSSP) TTTT

TTB
STTS


BTT

B

SS

TT




BSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FIIGRIKDLLIVYGRNHSPDDIEATIQEITRGRCAAIAVPSNGVEKLVAIVELNNRDTERLSFVTREVTS
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Known secondary structure (DSSP) GGG
TT
TTT
S
TT




 .........500.........510.........520.........530.......
Sequence AISTSHGLSVSDLVLVAPGSIPITTSGKVRRAECVKLYRHNEFTRLD
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Known secondary structure (DSSP) S


S
TT
S


SS



TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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