Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8h8cB_

Fold library idPDB HeaderMoleculeTitle
c8h8cB_3.36PDB header: toxinChain: B: PDB Molecule: putative rhs-family protein;


Added to library: Sat Jan 21 13:19:53 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKAGDPVSLVTGEEILTLNDVELPNGFVWSRTYRSSKASRNQGLGYGWRHAFQFELKEVTDEKHNVTSWT
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

SSSS

SSSS




TTS



TTTT
BSSSSBT


S




SSSSSS



TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SYQVYVGASCHFLNPNIRIVTLSSGDQYRFELVEDIWLLKQVRNGIFSTFQLRYSRNHRLIEVAHNKRPV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


SSS







SSS






TTT


TTTT


SSSS



SSS
SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LECQYDKQGRLVELLNAKTEQVLTTYIYDEQDDLVGATNDLGLTERYEYQDQHLIAKRVRPTGFTHYFEW
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
SSS

SSS





TTS



TT





TTS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGEGSSAKCIRNFGDSGIYDYRFHYEGAKSSYSDSLDNEWTFIHDEQGHLLEKSSPTGRTWQWHYDHLGR
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) SSSTTS


SSS
S
B
SS
TTS


SS




SSS



SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KEKAVFPDNSTTQYQYNQQGQLISKLHSSGAQIQYGYDSLGKLVKTVSPDGDLEKAYYNSLGQRVWDIDA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SSS
TTTTS




B
SSSSS

B


TT







BTTB




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LGCVTEYEYDKHGQVVKRESEDGKKSRWWWDKQQRLVAHEVDGTLLRYSYGATDLVNGIAYPDGCVAQIS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) SS

SSSSTT
SSSSSSS


SSSS
TTS
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence YDDYGRRTSIRYFNDEDKVGYSEEYAYDEFSRVAQIQTPEGVTSYQWGALAQQEAVIFPDGSHISYEYDQ
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)

SSSS



SSS


SSSS
SS


SSSS


SSS


T
 .........500.........510.........520.........530.........540.........550.........560
Sequence QRNLTKLVRSDGLAFEFWYDSEGLLSGTVGFDGLHSQFKYDSMGRIIRKDVADRTVLYSYDDAGFLQHIK
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TS



TTS



TTS

SSS





SSS



SS
B


SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence AGNGKNIVENHFNYTLGGRLTLASNRHQTLQYQYSSFGHLTKRIQGQFEIGEEFNRVGQRVSQTLPDKTS
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
BSSS





BTTB



SS



B
SSS
B


TTB


TTS
TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FNFSYDTNGRLSEIRFSDDSLPKIEFQYDVMGRLSVTETESFRESKLYDGVGRLVEQQWSGREKKYIYNA
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTTSSTT



SSSSSSS

SSS

SS

T
 .........710.........720.........730.........740.........750.........760.........770
Sequence QNRISSILDNTAGATHYQYDTLGYVTKVSEAGSTSTFESDSFGNPALADSKVMSDRIEAYAGVRYKYDQQ
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TSSTTT
TT

SSS


B
SSS
B
STT

BSSSSBSTT
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence GNQVKREGDGTVQKRVFDALSQLVEVHGDSSISHYEYDALGRRTKKITQNGITEFLWEGERLLGERTADG
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S

SS

TTS
SSS



SSS

SS
TT
SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FRWYLYQPETYIPLAVLENGSIYLYECDQVGKPERLKDSAGNIVWSASYDVHGFASIDVEEVRNPLRFQG
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
SSSS
TT
SS

SSS



SSS




SB
SS


B
SSS
 .........920.........930.........940.........950.........960....
Sequence QYFDQETNLHYNLARYYDPKLGRFIQQDPISIAGGINHYQYAVNPIQWIDPTGF
Predicted secondary structure




































SS confidence





















































Known secondary structure (DSSP)
BB
TTT

SSS

TTTSSBSS

SSSSSS
S
SS


S
TTS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D