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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8h7gK_

Fold library idPDB HeaderMoleculeTitle
c8h7gK_3.70PDB header: transcriptionChain: K: PDB Molecule: taf6-like rna polymerase ii p300/cbp-associated factor-


Added to library: Sat Dec 17 10:34:24 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEAVCG
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Known secondary structure (DSSP)

TS


TTTTTSS




TTT




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YGSQEALPMRPYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLSVPSAVSSLTDDLLKYYHQVTRAV
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S
SS

SSSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLCLGPYVRCL
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Known secondary structure (DSSP) SSS

S







SSSSTT
SSST
TT


STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGSVLYCVLEHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGW
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Known secondary structure (DSSP)


TSTTSS
SSTTS
TTS
TTSSTTGGG
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLLLFQESSSGGGAEPSFGSG
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Known secondary structure (DSSP) SSSTT
STTTSSSSS

S

SSTTTTTTT


TT
SS
 ..
Sequence LP
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

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