PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8gymC_

Fold library id	PDB Header	Molecule	Title
c8gymC_	UNK	PDB header: Blank PDB header	PDB COMPND:

Links to external resources
Added to library: Sat Jun 17 13:19:10 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V R L N L K S N V D Q N E Y P F L A K W D K D M R Q N Y E E Y Q N R I D A T T Y H L Q R S Q R G I A V F G E W M Y P R Y F Q K D I L E L E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S S
T T S
G G G T T S S T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L R R K Q Q L G K I Y P E E V S S Y T Q I N P D I A N D L N L T F N A K L L W P V R G M T V G A G F F A F A H L F N L P Y S F R L G L F V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S T T
S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P T A V E L A F T W G N K T S Q F K S I E F M D Y L L Q Y R V S K A L L E K N A K H F A E K K A A Y Q K E I N S S Q S V Q D L Y N Q L I T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T T T
S

. . . . . . .

Sequence V S E Q A P S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	R	L	N	L	K	S	N	V	D	Q	N	E	Y	P	F	L	A	K	W	D	K	D	M	R	Q	N	Y	E	E	Y	Q	N	R	I	D	A	T	T	Y	H	L	Q	R	S	Q	R	G	I	A	V	F	G	E	W	M	Y	P	R	Y	F	Q	K	D	I	L	E	L	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S		S	S	S														T																				T	S		G	G	G	T	T	S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	R	K	Q	Q	L	G	K	I	Y	P	E	E	V	S	S	Y	T	Q	I	N	P	D	I	A	N	D	L	N	L	T	F	N	A	K	L	L	W	P	V	R	G	M	T	V	G	A	G	F	F	A	F	A	H	L	F	N	L	P	Y	S	F	R	L	G	L	F	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S												T	T	T	S	T	T												S																			T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	T	A	V	E	L	A	F	T	W	G	N	K	T	S	Q	F	K	S	I	E	F	M	D	Y	L	L	Q	Y	R	V	S	K	A	L	L	E	K	N	A	K	H	F	A	E	K	K	A	A	Y	Q	K	E	I	N	S	S	Q	S	V	Q	D	L	Y	N	Q	L	I	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																												S	T	T	T	T															S
	.	.	.	.	.	.	.
Sequence	V	S	E	Q	A	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S