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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8gs2B_

Fold library idPDB HeaderMoleculeTitle
c8gs2B_2.84PDB header: rna binding protein/rnaChain: B: PDB Molecule: chat domain-containing protein;


Added to library: Sat Nov 12 10:55:29 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPIRDIQDRLKTAKFDNKDDMMNLASSLYKYEKQLMDSSEATLCQQGLSNRPNSFSQLSQFRDSDIQSKA
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Known secondary structure (DSSP)
T

TT
TT
GGGG




S
TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGQTGKFWQNEYEACKNFQTHKERRETLEQIIRFLQNGAEEKDADDLLLKTLARAYFHRGLLYRPKGFSV
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Known secondary structure (DSSP) TTTS
TTTTSSS

T



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PARKVEAMKKAIAYCEIILDKNEEESEALRIWLYAAMELRRCGEEYPENFAEKLFYLANDGFISELYDIR
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Known secondary structure (DSSP)

TT
T



TTGGG



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFLEYTEREEDNNFLDMILQENQDRERLFELCLYKARACFHLNQLNDVRIYGESAIDNAPGAFADPFWDE
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Known secondary structure (DSSP)


SSS

TTSS
TT
S

S
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVEFIRMLRNKKSELWKEIAIKAWDKCREKYWARQRELYDLAFMAQDGIEKKTRIADSLKSIAVHFYLNE
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Known secondary structure (DSSP) TT
TT


TT





 .........360.........370.........380.........390.........400.........410.........420
Sequence LESHEGGKGGHALIYDPQKAEKDQWQDKSFDYKELHRKFLEWQENYILNEEGSADFLVTLCREIEKAMPF
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Known secondary structure (DSSP) TTS


TTS
TTTS

STTS


T
 .........430.........440.........450.........460....
Sequence LFKSEVIPEDRPVLWIPHGFLHRLPLHAAMKEIFWERHASRYLP
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Known secondary structure (DSSP) TS
TTTS
TT



GGGGTS
STT
B

BGGGT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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