PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8gbeA_

Fold library id	PDB Header	Molecule	Title
c8gbeA_	1.46	PDB header: viral protein	Chain: A: PDB Molecule: protein a47;

Links to external resources
Added to library: Sat Mar 18 10:36:44 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N A V T H V S A N S I R Q H I L F N N F E T L H K D I Q S K I D L V N T F T P Q T K N L I F R N L L I V I T N S Y H L Q N L L D A L E Q L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P M Y V T D A Y S E A I L N E I G L C D K G I P N L S S I H F M I Y L V S G L T K L T T K Q S K I L M E I V T D A K I F C H H V N V L E Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S T
S T T
T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence I K K N V E K L E T V T S T L L E K Y T K L P L E V T L F K E S G L K I Q G N T Y I W D P E H K K S I C N L Y T V I K I M S Y I M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G S S
T T T T
T T
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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All images and data generated by Phyre2 are free to use in any publication with acknowledgement
Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	V	T	H	V	S	A	N	S	I	R	Q	H	I	L	F	N	N	F	E	T	L	H	K	D	I	Q	S	K	I	D	L	V	N	T	F	T	P	Q	T	K	N	L	I	F	R	N	L	L	I	V	I	T	N	S	Y	H	L	Q	N	L	L	D	A	L	E	Q	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S																		T	T	S																T	T															T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	M	Y	V	T	D	A	Y	S	E	A	I	L	N	E	I	G	L	C	D	K	G	I	P	N	L	S	S	I	H	F	M	I	Y	L	V	S	G	L	T	K	L	T	T	K	Q	S	K	I	L	M	E	I	V	T	D	A	K	I	F	C	H	H	V	N	V	L	E	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S											T		S	T	T																				T	S												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	I	K	K	N	V	E	K	L	E	T	V	T	S	T	L	L	E	K	Y	T	K	L	P	L	E	V	T	L	F	K	E	S	G	L	K	I	Q	G	N	T	Y	I	W	D	P	E	H	K	K	S	I	C	N	L	Y	T	V	I	K	I	M	S	Y	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T											G	G	G	G	S	S				T					T	T	T					T	T						G	G	G