Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8ffzB_

Fold library idPDB HeaderMoleculeTitle
c8ffzB_3.80PDB header: transcription/dnaChain: B: PDB Molecule: transcription factor tau 138 kda subunit;


Added to library: Sat Jun 24 09:10:52 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVLTIYPDELVQIVSDKIASNKGKITLNQLWDISGKYFDLSDKKVKQFVLSCVILKKDIEVYCDGAITTK
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)





TTTTTTTS
TTSSTTTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence NVTDIIGDANHSYSVGITEDSLWTLLTGYTKKESTIGNSAFELLLEVAKSGEKGINTMDLAQVTGQDPRS
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



S

SS
TTT
SS
TTT
T

 .........150.........160.........170.........180.........190.........200.........210
Sequence VTGRIKKINHLLTSSQLIYKGHVVKQLKLKKFINIRDHLATIVEVVKRSKNGIRQIIDLKRELKFDKEKR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) GGGTTTTTTT


SGGGTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSKAFIAAIAWLDEKEYLKKVLVVSPKNPAIKIRCVKYVKDIPDNFNATDLLQNQGLVMEEKEVLLNRFY
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TTSTT






S

TTGGGS









SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PLQNQTYDIADKSGLKGISTMDVVNRITGKEFQRAFTKSSEYYLESVGYRLFRIYDFEGKKKFFRLFTAQ
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TGGG
T
GGGTTT



TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence NFQKLTNPKGFDELGKSRTDLKTLNEDNFVALNNTVRFTTDSDGQDIFFWHGERSLRSLQRQRAILKVMN
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)













T








TTS

TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence TIGGVAYLREQFYESVSKYMGSTTTLDKKTVRGDVDLMVESEKLGARTEPVSGRKIIFLPTVGEDAIQRY
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT
S
ST
SS


TTS

TTT


TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ILKEKDSKKATFTDVIHDTEIYFKDGVQALIRAVVVTKSIKNEIMWDKITKLFPNNSLDNLKKKWTARRV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TT


SSS






TTSSS

TTTS

SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence RMGHSGWRAYVDKWKKMLVLAIKSEKISLRDVEELDLIKLLDIWTSFDEKEIKRPLFLYKNYEENRKKFT
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTSS
TT
TT








SS

 .........640.........650.........660.........670.........680.........690.........700
Sequence LVRDMSSMIQREISSLKKTYTRKISASTKDLSKSQSDDYIRTVIRSILIESNEIEALKNVGNESIDNVIM
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)















S


T





TTTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence DMAKEKQIYLHGSKLECTDTLPDILENRGNYKDFGVAFQYRCKVNELLEAGNAIVINQEPSDISSWVLID
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT
TT
T

TT

S


 .........780.........790.........800.........810.........820.........830.........840
Sequence LISGELLNMDVIPMVEIRTLTPPLIIYANSQTKLNTARKSAVKVPLGKPFSRLWVNGSGSIRPNIWKQVV
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) TT





GGGGS


SS


S











STTSSTTB
TTS
B
 .........850.........860.........870.........880.........890.........900.....
Sequence TMVVNEIIFHPGITLSRLQSRCREVLSLHEISEICKWLLERQVLITTDFDGYWVNHNWYSIYEST
Predicted secondary structure



















SS confidence
































































Known secondary structure (DSSP) STTTTTT

TTSTTT
TTTT
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D