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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8etiD_

Fold library idPDB HeaderMoleculeTitle
c8etiD_3.70PDB header: ribosomeChain: D: PDB Molecule: atp-dependent rna helicase has1;


Added to library: Sat Dec 3 13:12:50 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVI
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Known secondary structure (DSSP)

T

S

TTTT







TTSST

TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence IISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFR
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Known secondary structure (DSSP)
S
GGGS
S

SSS
TTTTTT

S
TTTTTT
SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMS
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Known secondary structure (DSSP) T
S

GGGT
TTTTTS

TT





SSSTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPP
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Known secondary structure (DSSP) STT


SSTTT

SSTTS




SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DDPRDYIHRVGGKSLMFLAPSELGFLRYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQSAKDG
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Known secondary structure (DSSP) S



TT
TTT






GGGS


TT
 .........360.........370.........380.........390.
Sequence YRSYLQAYASYSLKSIFDINKLDLAKVAKSFGFAHPPNVNI
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Known secondary structure (DSSP) S
S
TTTS
GGGS
TTTTT
SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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