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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8egrC_

Fold library idPDB HeaderMoleculeTitle
c8egrC_3.58PDB header: virusChain: C: PDB Molecule: gp15, receptor-binding protein, tail fiber;


Added to library: Sat Dec 17 09:37:41 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MYINNGRINYNNEYGYRRGIYREPFYSDNADYNTNSKSYYDYLARFNGFIFELCDFVNGLADDIQKMKDT
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Known secondary structure (DSSP)



TT





SS
STT
SSS











 .........80.........90.........100.........110.........120.........130.........140
Sequence YEALTLSNTDVTYTVGQKGDFDTLNHCFEHIEDLIVQPKSIRVILLKDYMMREQLFLRDKRYNHITITSE
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Known secondary structure (DSSP) GGGSB

SSSSSBSST
SS

SB

TT

B
S
S


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NDIVEAYETELNRQVEIKTNPIFRVKPLFYGINSTFPKIDFKLQNKDFSDTINCGFLMDNTTFEMTERGG
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Known secondary structure (DSSP)


SS



SSS
SS





S
SSS

B
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence STHFNFIGLCGVNGSHIQTNYCDFSYNGNREQLEEYNKDQNMYGDGLRIFNSSLTGNYMTVNRCGEIGIH
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Known secondary structure (DSSP)
BS
SS
SS


TT
B

S
SSTTT

SS
SSS



BS
S
S
B

S
SSBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FSHGASGYIDFTEARFNGHHGLMVTTGSQASARNCKITDTIDDNVVSYASSDIDLRSSDCSNSQTTYGVI
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Known secondary structure (DSSP) TT
S


SS
S
TT
B


TT


SS
STT

SS


SSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ATRSSNINFDKGIANGCGASGIMANRGCSIDATGATASRNKWHGVIASNNSKVDFTSGNANENGLDGIQC
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Known secondary structure (DSSP) SS

TT
B

S
SS
SSS

SS
B

S
SS
SSS

TT
B

S
SS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence THGSTVQARLSTTNGNKRNGVLAYAGDVYCQEINCDGNGRRGLEATRGGYVAAYGAKVSRSKDDNVLAYG
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Known secondary structure (DSSP) SS

SS
S
SS
SSS
SS
S
SSS
TT

TT
S
SS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SMISINEALIERAGRNGIEATRGGQIFADRITITGSGDFGILAYASKVFAEASNISGTKNEPVYATRGGE
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Known secondary structure (DSSP) S
SS
S
SSBS
SS

SS
S
SB
SS

TT


BS
SS
STT
 .........570.........580.........590.........600.........
Sequence VTCFGSNISSNKTVYNVYNGSRIFTDKDHGYSTNVDPQTLSSKGLIILG
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Known secondary structure (DSSP) SS


B
SS
STT

SSS


BSS
TT

SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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