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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8eduB_

Fold library idPDB HeaderMoleculeTitle
c8eduB_2.70PDB header: virusChain: B: PDB Molecule: capsid;


Added to library: Sat Feb 4 19:44:33 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGFANIQGRADLSDVHLPDQVIKDVLQTAPEASVLLNRARKVRMSSKKTKQPVLASLPDAYWVDGDTGLK
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Known secondary structure (DSSP)

S




GGGS
TTTS





S








SS
SSS









STT


 .........80.........90.........100.........110.........120.........130.........140
Sequence QTTKNIWSNVFMTAEELAVIVPIPDALIADSDLPLWDEVKPLLVEAIGKKVDDAGIFGNDKPASWPAALI
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SS
TT
SS

TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence PGAIAAGNSVTLGTGDDIGVDVATLGEQLALDGFSINGFISRPGLHWSLVGLRNAQGQPIYTPPLSTGLN
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Known secondary structure (DSSP) T
TTSSSST




TTT
B
TTS
BSSS
TTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GAPPTPALYGFPLNEVTSGVWDADEAILLGADWSKVVIGIRQDITFDLFSEGVISDSDGKVVLNLMQQDS
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Known secondary structure (DSSP) S



STT

B

SS


TTT
S
GGGSS

TTS
TTTTT
 .........290.........300.........310......
Sequence KALRVVFRVGFQVANPMTRLNPNEATRYPAGVIIPA
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Known secondary structure (DSSP)




SS


SSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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