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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8ecoE_

Fold library idPDB HeaderMoleculeTitle
c8ecoE_2.20PDB header: virusChain: E: PDB Molecule: major capsid protein;


Added to library: Sat Feb 4 19:42:44 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADISRADALALLATQELDSIIKPETSGSAALAAFRSIRMSAGTVSMPVLAALPTAGWVTDDTSGAATGTK
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Known secondary structure (DSSP)



GGG





SS








S
SSS








S
SS
GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PTSKVSWTGKNLVAEEIAVIVPVHENTIADSRFDIWGEVRPLVSQEFGRVLDEAVFFGVNKPATWLDPAL
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Known secondary structure (DSSP)






SS
TT
TT

TT

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence VPGAIAAGNTIADGTGIDLADDINEAFGFVEDDEFDVNVAFTGRFLRRRLRGLRDADNAPIYLDGVRSDN
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Known secondary structure (DSSP) T
TTSSSSTT




TTT
B
TTS
BSSSS
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence RTAEIYGQDLMYVGNRSWDRDEAVLLAGDRSKVLLGIREDVQVKLLTEATIGGINLAEKDMVALRFKFRV
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Known secondary structure (DSSP)

STT


SS


TTT
S
GGGSS
TTTGGGT
 .........290.........300....
Sequence AYSTAFSTAGGEVTDYPFAVITPD
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Known secondary structure (DSSP)



SSS
TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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