PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8e9hC_

Fold library id	PDB Header	Molecule	Title
c8e9hC_	2.70	PDB header: membrane protein	Chain: C: PDB Molecule: nadh-quinone oxidoreductase subunit c;

Links to external resources
Added to library: Sat Oct 15 12:26:42 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G D E P E I I A V R R G M F G N R D T G D T S G Y G R L V R P V A L P G S T P R P Y G G Y F D A V M D R L A E V L G E E R Y A M S I E R V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S G G G
S S S
S S T T
T T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V Y R D Q L T I E V S R V Q L P A V A S V L R D D P D L R F E L C L G V S G V H Y P E D T G R E L H A V Y P L M S I T H N R R I Q L E V A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T T T
T T S T T
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P D A D P H I P S L Y A V Y P T T D W H E R E T Y D F F G I I F D G H P S L T R I E M P D D W E G H P Q R K D Y P L G G I P V E Y H G A Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T
G G G T T T
T
S
S S S
T T
S
T T S T T S
T T

. . . . . . . . . 220

Sequence P P P D Q R R S Y S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	D	E	P	E	I	I	A	V	R	R	G	M	F	G	N	R	D	T	G	D	T	S	G	Y	G	R	L	V	R	P	V	A	L	P	G	S	T	P	R	P	Y	G	G	Y	F	D	A	V	M	D	R	L	A	E	V	L	G	E	E	R	Y	A	M	S	I	E	R	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									S	G	G	G		S	S	S		S	S	T	T		T	T													S				T	T												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	R	D	Q	L	T	I	E	V	S	R	V	Q	L	P	A	V	A	S	V	L	R	D	D	P	D	L	R	F	E	L	C	L	G	V	S	G	V	H	Y	P	E	D	T	G	R	E	L	H	A	V	Y	P	L	M	S	I	T	H	N	R	R	I	Q	L	E	V	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								T	T	S												T	T	T														T	T	S	T	T												T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	A	D	P	H	I	P	S	L	Y	A	V	Y	P	T	T	D	W	H	E	R	E	T	Y	D	F	F	G	I	I	F	D	G	H	P	S	L	T	R	I	E	M	P	D	D	W	E	G	H	P	Q	R	K	D	Y	P	L	G	G	I	P	V	E	Y	H	G	A	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S							T	T	T		G	G	G	T	T	T														T		S					S	S	S		T	T			S		T	T	S	T	T	S										T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	P	P	P	D	Q	R	R	S	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S