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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8e9gB_

Fold library idPDB HeaderMoleculeTitle
c8e9gB_2.60PDB header: membrane proteinChain: B: PDB Molecule: nadh-quinone oxidoreductase subunit b;


Added to library: Sat Oct 15 12:29:13 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GLEERLPGGILLSTVETVAGYVRKGSLWPATFGLACCAIEMMSTAGPRFDIARFGMERFSATPRQADLMI
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Known secondary structure (DSSP)
GGGSS
TTTT

BBS


SSTTS
GGGGT



BSSTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAVVQGVDHVVPVDIYLPGCPPRPEMLLH
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Known secondary structure (DSSP)

S

BGGGS
SS

TT

STTB
SSGGGTS

S

SS

 .........150.........160.........170.........180...
Sequence AILKLHDKIQQMPLGVNREEAIREAEQAALAVPPTIELKGLLR
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Known secondary structure (DSSP) T





GGG

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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