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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8e4mD_

Fold library idPDB HeaderMoleculeTitle
c8e4mD_3.44PDB header: membrane proteinChain: D: PDB Molecule: transient receptor potential cation channel subfamily m


Added to library: Sat Oct 29 11:09:19 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLVNFIQANFDAFGDIQGKYLRLSCDTDSETLYELLTQHWHLKTPNLVISNFALKPRMRKIFSRLIYIAQ
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SS

TT



S






 .........80.........90.........100.........110.........120.........130.........140
Sequence SKGAWILTGGTHYGLMKYIGEVVRDNTISENIVAIGIAAWGMVSNRDTLSAQYIMYILDNNHTHLLLVDN
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Known secondary structure (DSSP) T



SSS



TTTSS














SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GTVEAKLRNQLEKYISERTSQDSNYGGKIPIVCFAQGGGRETLKAINTSVKSKIPCVVVEQIADVIASLV
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Known secondary structure (DSSP)


S
B
TTSSSSSB




SSSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence TSSMVKEKLVRFLPRTVSRLPEEEIESWIKWLKEILESSHLLTVIKMEIVSNAISYALYKAFSTNEQDKD
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Known secondary structure (DSSP)

S
TTTT





SSSSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NWNGQLKLLLEWNQLDLASDEIFTNDRRWESADLQEVMFTALIKDRPKFVRLFLENGLNLQKFLTNEVLT
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Known secondary structure (DSSP)
T
TSSTTS


TT
TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence ELFSTHFSTLVYRNLQIAKNSYNDALLTFVWKLVANFRRSTRHPLQALFIWAILQNKKELSKVIWEQTKG
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Known secondary structure (DSSP) SS
S

TT



TT
T
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence CTLAALGASKLLKTLAKVKNDINAAGESEELANEYETRAVELFTECYSNDEDLAEQLLVYSCEAWGGSNC
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Known secondary structure (DSSP) T

S

S


SSSSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LELAVEATDQHFIAQPGVQNFLSKQWYGEISRDTKNWKIILCLFIIPLVGCGLVSFRKKLLWYYVAFFTS
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Known secondary structure (DSSP) TT
TSTTS
TTS

SGGGGSSTT




T
 .........570.........580.........590.........600.........610.........620.........630
Sequence PFVVFSWNVVFYIAFLLLFAYVLLMDFHSVPHTPELILYALVFVLFCDEVRQWYMNGVNYFTDLWNVMDT
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Known secondary structure (DSSP) T


SS

SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LGLFYFIAGIVFRLHSSNKSSLYSGRVIFCLDYIIFTLRLIHIFTVSRNLGPKIIMLQRMLIDVFFFLFL
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Known secondary structure (DSSP)

S
GGGGGGG
TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence FAVWMVAFGVARQGILRQNEQRWRWIFRSVIYEPYLAMFGQVPSDVDSTPEWITIPLVCIYMLSTNILLV
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Known secondary structure (DSSP)
S



TTS

T

 .........780.........790.........800.........810.........820.........830.........840
Sequence NLLVAMFGYTVGIVQENNDQVWKFQRYFLVQEYCNRLNIPFPFVVFAYFYMVVNEDNETLAWEGVMKENY
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Known secondary structure (DSSP) S

TTS
S

GGG

 .........850.........860.........870.........880.
Sequence LVKINTKANDNSEEMRHRFRQLDSKLNDLKSLLKEIANNIK
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Known secondary structure (DSSP) GGGGST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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