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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8dx4D_

Fold library idPDB HeaderMoleculeTitle
c8dx4D_2.49PDB header: dna binding proteinChain: D: PDB Molecule: maltodextrin-binding protein,putative pilin protein;


Added to library: Sat Sep 24 13:52:02 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGG
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Known secondary structure (DSSP)



TTS

TTS





TTTT
S
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKEL
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Known secondary structure (DSSP) TT
B





TTB
GGGTT
S

TTT
SS

SBSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KAKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTD
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Known secondary structure (DSSP) TTT




SSTT
TTSSSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence YSIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEF
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Known secondary structure (DSSP) TT

GGGTT





BBTTB



BTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVIN
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Known secondary structure (DSSP) TTSSS


SBTTSS


STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AASGRQTVDAALAAAQTNAAAKNIEKAKIAKLEADISAIKSASLSYYADESKYTDGGMISWVKKDGKIII
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Known secondary structure (DSSP) TTSS
SSS
SSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NGGFKDKIENLGMPYNGSYLLMSSPGHEKYLELSILPEGEISKSGLDKLKNDYGNLIDITNDQNKINIVI
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Known secondary structure (DSSP) SS




TT



TT


SSSS



SS


TTTSSTT
 ...
Sequence KLL
Predicted secondary structure
SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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