PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8di1A_

Fold library id	PDB Header	Molecule	Title
c8di1A_	2.20	PDB header: lyase	Chain: A: PDB Molecule: kdpg and khg aldolase;

Links to external resources
Added to library: Sat Aug 20 09:16:52 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R F D K K E T I R T M T D T G L V P V F C S C D V E V A K Q V I R A C Y N G G V R V F E F T N R E E A A H E V F G A V S R W I V E A C P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M I L G V G S I V D A P T A S L Y L Q S G A N F V V G P L T N P D I A K V C N R R L V P Y I P G C G S V S E V G Y A Q E L G C D I C K V F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S S
T T T
S T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G D V L G P G F V K A L K A P M P W S Q V M V T G G V K P K E A N L K A W F D A G A T C V G M G S N L F P P E A I A S G N W E K I T D I C A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S S
S S T
S S T T T S
T T

. . . . . . . . . 220

Sequence Q A L G V I R E V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	F	D	K	K	E	T	I	R	T	M	T	D	T	G	L	V	P	V	F	C	S	C	D	V	E	V	A	K	Q	V	I	R	A	C	Y	N	G	G	V	R	V	F	E	F	T	N	R	E	E	A	A	H	E	V	F	G	A	V	S	R	W	I	V	E	A	C	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S															T	T										S	T	T																S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	I	L	G	V	G	S	I	V	D	A	P	T	A	S	L	Y	L	Q	S	G	A	N	F	V	V	G	P	L	T	N	P	D	I	A	K	V	C	N	R	R	L	V	P	Y	I	P	G	C	G	S	V	S	E	V	G	Y	A	Q	E	L	G	C	D	I	C	K	V	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S										T	T		S					S	S											T	T	T									S										T	T		S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	D	V	L	G	P	G	F	V	K	A	L	K	A	P	M	P	W	S	Q	V	M	V	T	G	G	V	K	P	K	E	A	N	L	K	A	W	F	D	A	G	A	T	C	V	G	M	G	S	N	L	F	P	P	E	A	I	A	S	G	N	W	E	K	I	T	D	I	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		T	T							S	S			S	S											T		S					S	T	T	T	S							T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	Q	A	L	G	V	I	R	E	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)