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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8dfoI_

Fold library idPDB HeaderMoleculeTitle
c8dfoI_3.10PDB header: rna binding protein/rnaChain: I: PDB Molecule: crispr-associated protein, ct1133 family;


Added to library: Sat Feb 18 08:59:04 2023
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence LQALHGYYQRMSADPDAGMPPYLCGQCLITGERQKPIAQLHPSIKGGRDGVRGAQAVASIVSFNNTAFES
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Known secondary structure (DSSP)
TTSSSSS






TTT

SSB
SS


BSTTSBTTS
SBSS


STTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence YGKEQSINAPVSQEAAFSYVTALNYLLNPSNRQKVTIADATVVFWAERSSPAEDIFAGMFDPPRMHDLLV
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Known secondary structure (DSSP) TT

TTTTS

B
TTSS

TTSS

TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence AIRSGKRATDIMPDMDESVRFHVLGLSPNAARLSVRFWEVDTVGHMLDKVGRHYRELEIIPQFNNEQEFP
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Known secondary structure (DSSP) TT

GGGT
TT

TTSBTT

B



SSTTS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLSTLLRQTAVLNKTENISPVLAGGLRAMLTGGPYPQSLLPAVLGRIRAEHARPEDKSRYRLEVVTYYRA
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Known secondary structure (DSSP)
TTSTTSSSTT




S


TT



GGG
SSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALIKAYLIRNRKLEVPVSLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHM
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Known secondary structure (DSSP) TS




SS

SS


STT
S

T
 .........360.........370.........380.........390.........400.........410.....
Sequence LLKNASNHTAKLRKDPERKSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKK
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Known secondary structure (DSSP) SSS


TT
S


S


TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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