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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8dd7B_

Fold library idPDB HeaderMoleculeTitle
c8dd7B_3.30PDB header: circadian clock proteinChain: B: PDB Molecule: protein timeless,methylated-dna--protein-cysteine


Added to library: Sat Feb 18 09:20:38 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDWLLATPQLYSAFSSLGCLEGDTYVVNPNALAILEEINYKLTYEDQTLRTFRRAIGFGQNVRSDLIPLL
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Known secondary structure (DSSP)


GGGTT
TTTS
TTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ENAKDDAVLESVIRILVNLTVPVECLFSVDVMYRTDVGRHTIFELNKLLYTSKEAFTEARSTKSVVEYMK
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Known secondary structure (DSSP)

SS

GGGSS
SSSTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HILESDPKLSPHKCDQINNCLLLLRNILHIPETHAHCVMPMMQSMPHGISMQNTILWNLFIQSIDKLLLY
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Known secondary structure (DSSP) TT
SS

TTTS


TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMTCPQRAFWGVTMVQLIALIYKDQHVSTLQKLLSLWFSDSSDNGSNGRGMGGGMREGTSPMDKKELRRK
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Known secondary structure (DSSP) STTGGGT
SS






SSSSS
SS



STT


 .........290.........300.........310.........320.........330.........340.........350
Sequence KLVKRSKSSLINMKGLVQHTPTDDDISNLLKEFTVDFLLKGYSYLVEELHMQLLSNAKVPIDTSHFFWLV
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Known secondary structure (DSSP) TSSS


T
SS




 .........360.........370.........380.........390.........400.........410.........420
Sequence TYFLKFAAQLELDMEHIDTILTYDVLSYLTYEGVSLCEQLELNARQEGSDLKPYLRRMHLVVTAIREFLQ
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Known secondary structure (DSSP) TT

GGGTTTTSSTTSSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence AIDTYNKVTHLNEDDKAHLRQLQLQISEMSDLRCLFVLLLRRFNPSIHSKQYLQDLVVTNHILLLILDSS
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Known secondary structure (DSSP)


S
S

TTTTS

TTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence AKLGGCQTIRLSEHITQFATLEVMHYYGILLEDFNNNGEFVNDCIFTMMHHIGGDLGQIGVLFQPIILKT
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Known secondary structure (DSSP) TTTTTSSTT
TTSS
SSTTTTSTSSS

TTS

 .........570.........580.........590.........600.........610.........620.........630
Sequence YSRIWEADYELCDDWSDLIEYVIHKFMNTPPGKPSDDVQILLDLIIKENKAQHLLWLQRILIECCFVKLT
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Known secondary structure (DSSP)




TTTTTTTT




SSSTT

TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LRSGLKVPEGDHIMEPVAYHCICKQKSIPVVQWNNEQSTTMLYQPFVLLLHKLGIQLPADAGSIFARIPD
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Known secondary structure (DSSP)



SBTTB


TTT



B


SGGGGSS



TTTTTSSSB



 .........710.........720.........730.........740.........750.........
Sequence YWTPETMYGLAKKLGPLDKLNLKFDASELEDATASSPSRYHHTGPRNSNWLQLVMRSKC
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Known secondary structure (DSSP)
S
TTSTTSS


TT





TTTTTSSSSS

SS
S

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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