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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8d8oB_

Fold library idPDB HeaderMoleculeTitle
c8d8oB_3.35PDB header: hydrolaseChain: B: PDB Molecule: pappalysin-1;


Added to library: Sat Oct 1 12:57:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPSRALYFSGRGEQLRLRADLELPRDAFTLQVWLRAEGGQRSPAVITGLYDKCSYISRDRGWVVGIHTIS
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Known secondary structure (DSSP)


SSS


TTS


SS

SS

TTSS

S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DQDNKDPRYFFSLKTDRARQVTTINAHRSYLPGQWVYLAATYDGQFMKLYVNGAQVATSGEQVGGIFSPL
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Known secondary structure (DSSP) TTTT

SS
SS

SS


TTS
SS
TT
S

S
SS
SG
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQKCKVLMLGGSALNHNYRGYIEHFSLWKVARTQREILSDMETHGAHTALPQLLLQENWDNVKHAWSPMK
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Known secondary structure (DSSP) GGGGS

TT



SS


TTSS




SS

S
GGGTBT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGSSPKVEFSNAHGFLLDTSLEPPLCGQTLCDNTEVIASYNQLSSFRQPKVVRYRVVNLYEDDHKNPTVT
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Known secondary structure (DSSP) TTB








S






SS

SGGGS
STTS

B


TTS
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence REQVDFQHHQLAEAFKQYNISWELDVLEVSNSSLRRRLILANCDIQTCFDPDSPHRAYLDVNELKNILKL
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Known secondary structure (DSSP) GGGTB




SSS







SSSTT
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence DGSTHLNIFFAKSSEEELAGVATWPWDKEALMHLGGIVLNPSFYGMPGHTHTMIHAIGHSLGLYHVFRGI
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Known secondary structure (DSSP)
TTSS

B
SS
SS



TTSGGGGSTT
S
GGGSSBTTBSTT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SEIQSCSDPCMETEPSFETGDLCNDTNPAPKHKSCGDPGPGNDTCGFHSFFNTPYNNFMSYADDDCTDSF
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Known secondary structure (DSSP) S
S
TT
TT

SS

SSSTTS
SSS





SS
S


S


SSS




S

TTBTTSS

TTS

B
 .........500.........510.........520.........530.........540.........550.........560
Sequence TPNQVARMHCYLDLVYQGWQPSRKPAPVALAPQVLGHTTDSVTLEWFPPIDGHFFERELGSACHLCLEGR
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Known secondary structure (DSSP)
TTTT
TTTS








S


SS




TT


B


TTSSTTTB
TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ILVQYASNASSPMPCSPSGHWSPREAEGHPDVEQPCKSSVRTWSPNSAVNPHTVPPACPEPQGCYLELEF
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Known secondary structure (DSSP)
B

SS


SS
TT
GGGGSSS


SSTTS

TTSB
S


SSTTSS


S
SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LYPLVPESLTIWVTFVSTDWDSSGAVNDIKLLAVSGKNISLGPQNVFCDVPLTIRLWDVGEEVYGIQIYT
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Known secondary structure (DSSP)




SSSSSSSSB

TTS



B


SSS





S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LDEHLEIDAAMLTSTADTPLCLQCKPLKYKVVRDPPLQMDVASILHLNRKFVDMDLNLGSVYQYWVITIS
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Known secondary structure (DSSP) S
SS




TT
GGGGG

B
SS

SS

S



TT




TT
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence GTEESEPSPAVTYIHGSGYCGDGIIQKDQGEQCDDMNKINGDGCSLFCRQEVSFNCIDEPSRCYFHDGDG
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Known secondary structure (DSSP) TTB






TTS

TTSSS

GGGT
S


S


TTSSB
TTS
B
TT
TTTT

TTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence VCEEFEQKTSIKDCGVYTPQGFLDQWASNASVSHQDQQCPGWVIIGQPAASQVCRTKVIDLSEGISQHAW
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Known secondary structure (DSSP)


SSSTTT

S


TT
SSS

SSS
S
TTSSS

TT


B
S
S


SSSB
 .........920.........930.........940.........950.........960.........970.........980
Sequence YPCTISYPYSQLAQTTFWLRAYFSQPMVAAAVIVHLVTDGTYYGDQKQETISVQLLDTKDQSHDLGLHVL
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Known secondary structure (DSSP)


SS


SS
TTT



SSB


BTTB
S

TT


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence SCRNNPLIIPVVHDLSQPFYHSQAVRVSFSSPLVAISGVALRSFDNFDPVTLSSCQRGETYSPAEQSCVH
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Known secondary structure (DSSP)
GGG




SSS



SSTT

SS

S

TT



STTTS

S
 .........1060.........1070.........1080.........1090.........1100.........1110
Sequence FACEKTDCPELAVENAYLNCSSSDRYHGAQCTVSCRTGYVLQIRTVTCTEGKWNKQVACE
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Known secondary structure (DSSP)
SS
SSSS




TTSSSS

TT

TT



TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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