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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8cv1A_

Fold library idPDB HeaderMoleculeTitle
c8cv1A_2.60PDB header: biosynthetic proteinChain: A: PDB Molecule: polyketide synthase pks13;


Added to library: Sat Feb 18 12:50:08 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTVNEMREWLRNWVANATGQSADAIDESTPMVELGLSSRDAVAMASDIEDLTGVTLTATVAFRHPTIESL
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Known secondary structure (DSSP)

TT


SS
S
SSS
GGGGT

ST




TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATVIIEGEPEPEPYDEDEDWSRTRDVEDIAIVGVATRFPGDLNTPDEMWEALLEGKDCVTDLPEDRWTEF
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Known secondary structure (DSSP) T
S






TT




SS



BTTTB
ST



B


TTSSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDEPRIAERVKKARTRGGYLTDIKGFDSEFFALSKMEADNIDPQQRMALELTWEALEHARIPASSLRGES
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Known secondary structure (DSSP) TTSS


BB

S
SS
TTTTT

TS
TT

GGGGTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGVYIGSSTNDYSFLAMSDPSIAHPYAITGTASSIIANRVSYFYDFRGPSVAVDTACSSSLVATHQGVQA
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Known secondary structure (DSSP)




TSSTTT

TS
T

S


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LRAGEADVAIVGGVNALVTPLVTVGFDEVGGVLAPDGRIKSFSSDADGYARSEGGGMLVLKRISDARRDG
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Known secondary structure (DSSP) TSS
S


SS
SSB
SS



TTBTT


B

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence DQILAVIAGSAVNHDGRSNGLLAPNPDAQAEVLRKAYKDAGINPRDVDYIEAHGTGTILGDPIEADALGR
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Known secondary structure (DSSP)





S
SSTT


T

GGG







TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IVGKGRPADKPALLGAVKSNLGHLESAAGAASLAKMTLALANDKLPPSINYAGPNPYIDFEKERLKVNDT
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Known secondary structure (DSSP) TSTT

TTS

T
TTTT
B



S

SB
TT

T

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence VSDWPRYSGKAIAGVSGFGFGGANAHVVMREVLAGDLVETEAAQRLLEQAREELEAKEAEEPTKQLVPLA
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Known secondary structure (DSSP)
B



TTSS

TTS


GGGG


S




 .........570.........580.........590.........600.........610.........620.........630
Sequence VSAFLTSRKRQAAAELADWIDSPEGRASSLESIGRSLSRRNHGRSRAVVLAHDHDEAIKGLRALAEGKQH
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Known secondary structure (DSSP) SSSTS
TS


SSSTT


 .........640.........650.........660.........670.........680.........690.........700
Sequence PSVLSADGPVTNGPVWVLAGFGAQHRKMGKSLYLRNEVFAEWINKVDALIQDERGYSILELILDDNVDYT
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Known secondary structure (DSSP) TTSS

SS



TT


TTTT
TSS

SS

SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence DATCEYPIEVVQLVIFAIQIALGELLRHHGAKPAAVVGQSLGEAAASYFAGGLSLADATRTICSRSHLMG
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Known secondary structure (DSSP) TTT
SSTT


S
SSTTTSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence EGEAMLFGEYIRLMALVEYSADEIKTVFSDYPDLEVCVYAAPTQTVIGGPPDQVDAIIARAESEGKFARK
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Known secondary structure (DSSP) T

GGG

S

TTTTTT
SS
TT
TT

 .........850.........860.........870.........880.........890.........900.........910
Sequence FQTKGASHTQQMDPLLGELAAELQGIEPKPLTTGYFSTVHEGTFIRPGSAPIHDVDYWKKGLRHSVYFTQ
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Known secondary structure (DSSP)
S



TTSGGGTTTTTT





SSTTTTT
TT




SS
B
 .........920.........930.........940.........950.........960.........970.........980
Sequence GIRNAVDNGHTTFLELAPNPVALMQVGLTTASAGLHDAQLIATLARKQDEVESMISAMAQLYVHGHDLDF
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Known secondary structure (DSSP) TT


SSS
SSTT
SS



TTS
TT
S

G
 .........990.........1000.........1010......
Sequence RTLFPRRSKGLAGALDFANIPPTRFKRKEHWLPAHF
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Known secondary structure (DSSP) GGGS


S
STTTGGGS

















Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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