PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8csxQ_

Fold library id	PDB Header	Molecule	Title
c8csxQ_	2.40	PDB header: transport protein/structural protein	Chain: Q: PDB Molecule: ammonium transporter rh type a;

Links to external resources
Added to library: Sat Jul 23 08:44:12 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R F T F P L M A I V L E I A M I V L F G L F V E Y I F F E L Y P L F Q D V H V M I F V G F G F L M T F L K K Y G F S S V G I N L L V A A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T G G G B T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G L Q W G T I V Q G I L Q S Q G Q K F N I G I K N M I N A D F S A A T V L I S F G A V L G K T S P T Q M L I M T I L E I V F F A H N E Y L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S E I F K A S D I G A S M T I H A F G A Y F G L A V A G I L Y R S G L R K G H E N E E S A Y Y S D L F A M I G T L F L W M F W P S F N S A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T T T T
G G G S S
S S S
B
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A E P G D K Q C R A I V N T Y F S L A A C V L T A F A F S S L V E H R G K L N M V H I Q N A T L A G G V A V G T C A D M A I H P F G S M I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S G G G
G G G T T T T T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence G S I A G M V S V L G Y K F L T P L F T T K L R I H D T C G V H N L H G L P G V V G G L A G I V A V A M G A S N T S M A M Q A A A L G S S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T T T S S
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390

Sequence G T A V V G G L M T G L I L K L P L W G Q P S D Q N C Y D D S V Y W K V P K T R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S
S T T T T
G G G T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	F	T	F	P	L	M	A	I	V	L	E	I	A	M	I	V	L	F	G	L	F	V	E	Y	I	F	F	E	L	Y	P	L	F	Q	D	V	H	V	M	I	F	V	G	F	G	F	L	M	T	F	L	K	K	Y	G	F	S	S	V	G	I	N	L	L	V	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																																									T						G	G	G	B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	Q	W	G	T	I	V	Q	G	I	L	Q	S	Q	G	Q	K	F	N	I	G	I	K	N	M	I	N	A	D	F	S	A	A	T	V	L	I	S	F	G	A	V	L	G	K	T	S	P	T	Q	M	L	I	M	T	I	L	E	I	V	F	F	A	H	N	E	Y	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S																											T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	E	I	F	K	A	S	D	I	G	A	S	M	T	I	H	A	F	G	A	Y	F	G	L	A	V	A	G	I	L	Y	R	S	G	L	R	K	G	H	E	N	E	E	S	A	Y	Y	S	D	L	F	A	M	I	G	T	L	F	L	W	M	F	W	P	S	F	N	S	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					T	T		T	T	T	T															T			G	G	G	S	S			S	S	S		B																									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	E	P	G	D	K	Q	C	R	A	I	V	N	T	Y	F	S	L	A	A	C	V	L	T	A	F	A	F	S	S	L	V	E	H	R	G	K	L	N	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	C	A	D	M	A	I	H	P	F	G	S	M	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T																													S	G	G	G										G	G	G						T	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	S	I	A	G	M	V	S	V	L	G	Y	K	F	L	T	P	L	F	T	T	K	L	R	I	H	D	T	C	G	V	H	N	L	H	G	L	P	G	V	V	G	G	L	A	G	I	V	A	V	A	M	G	A	S	N	T	S	M	A	M	Q	A	A	A	L	G	S	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T					S	S						T	T																T	T	S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Sequence	G	T	A	V	V	G	G	L	M	T	G	L	I	L	K	L	P	L	W	G	Q	P	S	D	Q	N	C	Y	D	D	S	V	Y	W	K	V	P	K	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	T	T	S					S	T	T	T	T		G	G	G	T	S				S