Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8cllH_

Fold library idPDB HeaderMoleculeTitle
c8cllH_3.40PDB header: transcriptionChain: H: PDB Molecule: general transcription factor 3c polypeptide 2;


Added to library: Sat Jun 24 09:24:47 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)


SB
TTSSB

S


GGG


GGG

TTTS
S

B


 .........80.........90.........100.........110.........120.........130.........140
Sequence VQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPL
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) TTS





B

BTT



TTT


SS




TT





S
SS



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence SQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLL
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) TS









TTTSTT


SS


SSSS


TT



TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQ
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TTS

S
TT

SS


S
S

TT

S

TT
S
SSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence HLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIK
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TTSTT


TTT
TTS


S

SS



SS
TT
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVW
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TT
TTS
S
S


TT
SS
GGGS
TT



SSS




SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYRTYTETVNHHYLLFQDT
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTTTTTS


TTS
GGG
S
GGGG


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLAS
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
TT

TTGGGSTTT




SS

TT


SSTTTTTT

GGG

 .........570.........
Sequence PLGHRMQLESRAHFNAMFQ
Predicted secondary structure













SS confidence


















Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D