Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8cllG_

Fold library idPDB HeaderMoleculeTitle
c8cllG_3.40PDB header: transcriptionChain: G: PDB Molecule: general transcription factor 3c polypeptide 4;


Added to library: Sat Jun 24 09:13:25 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLK
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)



SS
B
SSS

SSSBSS

TT



S


SS




 .........80.........90.........100.........110.........120.........130.........140
Sequence VGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRCLLAALTMDN
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)
S

S

TTT
SSBTTB



S

TT
SSSSS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SSSS

TTTT
S
TTT




TTSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence GSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIK
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
TTSSS

SGGG


SSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILPVNLKAVKGYFTLRQPVILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)






SS



SS







TTTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence NVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGIA
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
SS
SS



TTT


TTS

SSS
T
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLIDLVRWKILKDK
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
TTSS

BTTB

SS



S
T
SS

SGGGS
 .........500.........510.........520.........530.........540.........550.........560
Sequence HIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKEPMEEKLLEIQGKIEAVEMHLTREHMKRVLG
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP) S

T

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence EVYLHTWITENTSIPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) S


TT

S


GGG

S
SS



TTTT




SS
 .........640.........650.........660.........670.........680.........
Sequence CSNGHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF
Predicted secondary structure



































SS confidence


























































Known secondary structure (DSSP)
GGG
B
SSS

B

SS


TTSS




TTS
TTS

SSS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D