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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8cliA_

Fold library idPDB HeaderMoleculeTitle
c8cliA_3.20PDB header: transcriptionChain: A: PDB Molecule: general transcription factor 3c polypeptide 1;


Added to library: Sat Jun 24 09:06:48 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFYEEPRERPDLQ
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Known secondary structure (DSSP)

S
TT
B
T
SS

SS


T
TT
SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence LQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKERKNITNDIRTKSLQPRCTMVE
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Known secondary structure (DSSP)



B

B
SSSS
B

B





S
SS


B
TT
TT


SB
TTTTT

B
TT

B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFDRWGKKLIIVASQAMRYRALIGQEGDPDLKLPDFSYCILERLGRSRWQGELQRDLHTTAFKVDAGKLH
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Known secondary structure (DSSP) GGG
TTTS
TT



TTTTS

BTTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence YHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLR
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Known secondary structure (DSSP) T

TTS
GGG





STTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EELGLCERTFKRLYQYMLNAGLAKVVSLRLQEIHVMVRCLKLLKTVPPVDIVFERDMLTQTYDLIERRGT
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Known secondary structure (DSSP) TTT

TTS











TTS
GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence KGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYQREKARSE
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Known secondary structure (DSSP) G
T

TTSTTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLTTVSLAAVIEEVRETYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIVRLVR
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Known secondary structure (DSSP) TS








SS

T

S


 .........500.........510.........520.........530.........540..
Sequence NLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISN
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Known secondary structure (DSSP) TTS

TT


TT

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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