PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8c01e_

Fold library id	PDB Header	Molecule	Title
c8c01e_	2.70	PDB header: ribosome	Chain: E: PDB Molecule: 40s ribosomal protein s15;

Links to external resources
Added to library: Sat Dec 31 10:49:14 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A Y T T V G S I L K T W T H G K L P K L F K V I P S L R N W Q D V I Y V T N P E E W S P H V V Y E A T K L F V K E S Q K F I N L I L L E R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S
G G G S T T
G G G S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R D N I E T S E D H S L N Y H I Y R A V K K S L Y K P S A F F K G F L F P L V N V R E A T I A G S V L A K V S V P A L H S S A A L S Y L L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S
S
S S T T T T T
T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200

Sequence P T T V F I K I L L D K K P Y Q T V D D C V Y Y F P V I W H K A F L T F A Q R D Q R D F L L E T V R Q P E I R R E L L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G
T T
T T
T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Y	T	T	V	G	S	I	L	K	T	W	T	H	G	K	L	P	K	L	F	K	V	I	P	S	L	R	N	W	Q	D	V	I	Y	V	T	N	P	E	E	W	S	P	H	V	V	Y	E	A	T	K	L	F	V	K	E	S	Q	K	F	I	N	L	I	L	L	E	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T								T	T			S	S									G	G	G	S	T	T										G	G	G	S										T	T												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	D	N	I	E	T	S	E	D	H	S	L	N	Y	H	I	Y	R	A	V	K	K	S	L	Y	K	P	S	A	F	F	K	G	F	L	F	P	L	V	N	V	R	E	A	T	I	A	G	S	V	L	A	K	V	S	V	P	A	L	H	S	S	A	A	L	S	Y	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	S													S		S	S								T	T	T	T	T														T	S	S														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence	P	T	T	V	F	I	K	I	L	L	D	K	K	P	Y	Q	T	V	D	D	C	V	Y	Y	F	P	V	I	W	H	K	A	F	L	T	F	A	Q	R	D	Q	R	D	F	L	L	E	T	V	R	Q	P	E	I	R	R	E	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T								G	G	G											T	T													T	T												T								T	T