PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8bntB_

Fold library id	PDB Header	Molecule	Title
c8bntB_	1.40	PDB header: cytosolic protein	Chain: B: PDB Molecule: rho guanine nucleotide exchange factor 2;

Links to external resources
Added to library: Sat Dec 10 10:20:05 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S M E M D E K D F A A D S W S L A V D S S F L Q Q H K K E V M K Q Q D V I Y E L I Q T E L H H V R T L K I M T R L F R T G M L E E L H L E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S S S
T T S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G V V Q G L F P C V D E L S D I H T R F L S Q L L E R R R Q A L C P G S T R N F V I H R L G D L L I S Q F S G P S A E Q M C K T Y S E F C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T S
T T
S S
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R H S K A L K L Y K E L Y A R D K R F Q Q F I R K V T R P A V L K R H G V Q E C I L L V T Q R I T K Y P L L I S R I L Q H S H G I E E E R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S G G G T T
T
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . .

Sequence D L T T A L G L V K E L L S N V D E G I Y Q L E K G A R L Q E I Y N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	M	E	M	D	E	K	D	F	A	A	D	S	W	S	L	A	V	D	S	S	F	L	Q	Q	H	K	K	E	V	M	K	Q	Q	D	V	I	Y	E	L	I	Q	T	E	L	H	H	V	R	T	L	K	I	M	T	R	L	F	R	T	G	M	L	E	E	L	H	L	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		S	S	S					S						T	T	S																															T	T												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	V	Q	G	L	F	P	C	V	D	E	L	S	D	I	H	T	R	F	L	S	Q	L	L	E	R	R	R	Q	A	L	C	P	G	S	T	R	N	F	V	I	H	R	L	G	D	L	L	I	S	Q	F	S	G	P	S	A	E	Q	M	C	K	T	Y	S	E	F	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S	T	T																							S		T	T		S	S															T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	H	S	K	A	L	K	L	Y	K	E	L	Y	A	R	D	K	R	F	Q	Q	F	I	R	K	V	T	R	P	A	V	L	K	R	H	G	V	Q	E	C	I	L	L	V	T	Q	R	I	T	K	Y	P	L	L	I	S	R	I	L	Q	H	S	H	G	I	E	E	E	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																												S	G	G	G	T	T																											T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Sequence	D	L	T	T	A	L	G	L	V	K	E	L	L	S	N	V	D	E	G	I	Y	Q	L	E	K	G	A	R	L	Q	E	I	Y	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T						T	T								T