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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bfyA_

Fold library idPDB HeaderMoleculeTitle
c8bfyA_1.55PDB header: carbohydrateChain: A: PDB Molecule: putative secreted cellobiose-binding (transport system


Added to library: Sat Feb 4 20:16:17 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTKITLGLFGTAGFEESGLYKEYEKLHPDVDIQQTVVERNENYYPALLNHLTTGSGLQDIQMVEVGNIAE
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Known secondary structure (DSSP)
S


TTTTT
TTS
S
S

STTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IVGTQSDKLLDLSKYGKESDYLPWKWSQGSTSGGQTVALGTDVGPMAICYRKDLFEAAGLPSDREEVGKL
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Known secondary structure (DSSP) GGGB

GGGTS
GGGS
TB
TTS
B


TT


ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence WTGSWDKFVDAGNQYKKKAPKGTTFLDSPGGLLQAILSSEKDRFYDASGKVIYKTNPAVKSAFDLTAKAA
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Known secondary structure (DSSP) STT
T

TT
S
TT
SBSSB
TT

B
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KAGLVGNQTQFQPAWDTTIANSKFAAMSCPPWMLGYIKGKSKPEAAGKWDIAQAPKSGNWGGSFLSVPKN
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Known secondary structure (DSSP) TT
B
S

SSSTT


TTS
GGGTT

SS


BTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKNAEEAAKLAAWLTAPEQQAKLFAVQGSFPSTPAAYDSAAVKDAKNDMTGDAPIGTIFAEAAKNIPVQT
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Known secondary structure (DSSP) STTTS

S
GGGGGST


GGGTT

TT



B
 .........360.........370.........380.........390...
Sequence IGPKDQIIQQGLTDNGVILVTQGKSASDAWKNAVKTIDNALDK
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Known secondary structure (DSSP)

TTTTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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