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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bfhA_

Fold library idPDB HeaderMoleculeTitle
c8bfhA_2.20PDB header: rna binding proteinChain: A: PDB Molecule: ccr4-not transcription complex subunit 11;


Added to library: Sat Dec 31 10:47:34 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence KRIAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLQSSQITEYFSVL
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Known secondary structure (DSSP)




TTTS



GGGGGSS


GGG



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VNDSLHSEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYQNRLVRLVCVFLQSLIRNKIINVQDLFI
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Known secondary structure (DSSP) T






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TT
S
 .........150.........160.....
Sequence EVQAFCIEFSRIREAAGLFRLLKTL
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Known secondary structure (DSSP) TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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