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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bdaI_

Fold library idPDB HeaderMoleculeTitle
c8bdaI_20.70PDB header: protein transportChain: I: PDB Molecule: intraflagellar transport protein 144;


Added to library: Sat Jan 14 10:05:53 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKKLFGVGPDLLGDGKVLFEWSPKGNFLAAAGSKRKVNIFDRNGRLYDEVHFPPAEYPNPDGRACAAAQM
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Known secondary structure (DSSP)

TTSS
SS


TTSS

SSS
SS







SS



SSS
SBSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QWDPAGEQLAILPAGNTHVFIWLAGNKEVQKIESEFKTQEFSCMAWSRNGMYLGVATVKGNVMMYNARER
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Known secondary structure (DSSP)
TTSS
BTT
STTT


TTTS


SSSS
TTS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KKTPLVGKHTKKIVAAAWNKDNIMALAGQDKTVTLTDGVTGDTIKTFHLKDVPMDLCVSDKKEDGYSRRE
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Known secondary structure (DSSP)

S
SS


TT
TTSTTT


SS
B









SS


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ENTYSLNINRKTLYIMQCTAEGDRPLELAFLDTYGPIMKHSWFGDGYILLGYKNGYVAVVSSHSREISEE
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Known secondary structure (DSSP) S

TTT

SSS

S




GGG



TTTTTS


SSS

S

 .........290.........300.........310.........320.........330.........340.........350
Sequence VHSGKYLDTLTDVTYCASLGRVAMAGANCVRVLDANADYNEIKGDAVDLDANQAIEKVGWTKDGQVLTVG
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Known secondary structure (DSSP) S

S

S

TTTT


SS
GGGTS
TTT


TT


SS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence THNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENEPAFCGLGPSHAAVGMNNQ
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Known secondary structure (DSSP) SSS

S





TTSSSS
TTT
S
SS
BS


SS
BSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVVVHPISVEAGHAPDELDVVIPGPGQPANI
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Known secondary structure (DSSP) SSSSTT
SS


B
SSTTS


TT

TTTT
TT
TTS


 .........500.........510.........520.........530.........540.........550.........560
Sequence TCVALTPTFVITGSRTGTLSYYLSPDVTPVNEFRHDDGGIVRLFPQATGARLVFEDDKGALHLFNPVNDH
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Known secondary structure (DSSP)
SS
SS

SSSSS

S
TTS





B
SSSSS
SSS
TTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VVAVPYTGRAETVMWDTSDTNVMVIGDGTALHSFLYVPVSLTGPQVQDLGKQAVPATHTPLTVCNGVVGC
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Known secondary structure (DSSP)
S

S

SBTT
SSS
SS

SSS



SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence RLKSGAMDNVTLESHKMLQPGDAVARAAPAKRFAAALKLYKLRDAVECAKQLRQVESWRTLALAALDVLD
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Known secondary structure (DSSP)
SSS



SSSTT
GGGTTSTTT
T
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IDTAINAYREIGDASMVLSLERVRQHEDRNLLSAHIMVLLEKDYGQAQELFLRSSVPRAALEMRMDLKHW
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Known secondary structure (DSSP)
TTS
SSSSSS

S

SSTT

TSS
STTT

 .........780.........790.........800.........810.........820.........830.........840
Sequence TDALKLAEQLDPDAIATICKEHGAMLEMTGEYSNAKSHYQQALDALAVSVGPAQPDLEAACKAGIARTTL
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Known secondary structure (DSSP) TTT
TTTTSS
T
SS


 .........850.........860.........870.........880.........890.........900.........910
Sequence QLGDLRQGRQLAMQLNSQTLFKECALILEGLQQLTEAAEMYERAGQFERAASIYIQTKNFAAAAPLMARI
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Known secondary structure (DSSP) TTT
T
SSTTTT
TTTT
TT
TTTSSTTTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence SSSKLQLQFAKAKEAEGRWQEAAAAYEAAGDMDAVVRLCLERLSQPQRAYAIVRKTQSVEAANQLSRFCL
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Known secondary structure (DSSP)
STT
TT
TS



ST
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QSQDFGGAVEFLLMAGQMDQAFDIAMGHNEMDTFARIVAASAKPVDYQRIAQYYESRGEYDKAADMWSKC
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Known secondary structure (DSSP) T


STTT
SSSTTT
S
SSS
T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DQAPRAVQLYLKVGTNPALEKAVQVVEQTRSHQLGVLVLDYVNEEKDGTTRDEFRFKLNIAMGQFAEAAR
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Known secondary structure (DSSP) T

TT



TTTS
TTT
S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DALEMARFEQEEGNYRVAHDKLFGTVKQLEALNTKPPGELLRALMLLHSYTLVKSLIAINDHTTAARMLV
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Known secondary structure (DSSP) TTT
TTT



TTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence RVARNISKFPKHIVPILTSTVIECHRANLKKTAFEYASMLMRPEYRDQVAVKYKKKIELMVRKPEKDPEE
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Known secondary structure (DSSP) S
SS
TTTTT
STT
SSSS
S

SS


 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LEEPLADCPFCNMPGPETELQCISCQNILPFDLATGKRMVLSDWAECPGCKFPASASQFIRIISAEGRCP
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Known secondary structure (DSSP)







SSS




SS

TTTT



SSSS



SSS
TTT

SS
T
 .........1340.........1350.........1360.......
Sequence MCNDPVDLAHVRKVQDPLTKIKQQQAQQTNASGGGAS
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Known secondary structure (DSSP) TT




TTT

B


SSTTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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