PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8bdaE_

Fold library id	PDB Header	Molecule	Title
c8bdaE_	20.70	PDB header: protein transport	Chain: E: PDB Molecule: intraflagellar transport protein 139;

Links to external resources
Added to library: Sat Jan 14 12:12:48 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A D R V L A L V H Y Y A R E G Y F R H V Q T V C N E V L K K R P G D G V L T F W R A Y G L L M E G N T A D A M R D L S S I Q G N S D L E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
S S S
T T T
S T T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A V A A A Q L L G H E S A K V P D H D A I I D L Q A K L E I E E R T A S D Q P C L H L A S F Y L Y T K S K E R A R G L V E R V L R N Q P D M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T S
T T S T T T T T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V P A Q V L L G W I I I S Q Q Q D D E Y D M L F D E S E L D D A L S H F E Q A V E H D H N D L Q A L L G K A K I M E L K K Q L G P C L D V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T
S S
S
T T
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T E I N V R F G W F V P A L V E K T R M L M M L G D W E Q V T E T L Q R V L A A D Q Q N I M A Q A W N C M I S L T R E G N N K Q A A K Q L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T T T S S T T S S
S
T T
T T S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D L F S S M N R Q E P K N A E L F F R V A R P F G R L A C S D P T L L G I T Y L M A D R A A Q L R P E M A A Y V V E A A A Q K L M M D E T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S
T T T T T
S
G G G T T
S T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence N A T E R F T Q A L Q L D E L N L E A N A G A L E A Q I M A G E L E E A A G Q I M F L E D M F T N A A A A P T L L Y L K G L L A W K Q G M P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S T T T T
S S T T S S
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence S E G L G L L E R S I A A L F S A A A D F H G P S L E L Y A A L N P A R I T A V V R L L L Q S I G G E P R A P T E A P S P L I S K V T R A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
T
G G G T T T S
S S S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence D L L N K Q A P A L Q E S A L L H A R A L Y L N G N L D G A L R K A G E I L R M N P E E S S A H L L I C S V Y V A Q D K P E L A V S A L D Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
S S
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence A V S S N F A I R E T P L Y H V V Q A K V L V A N N K L D D A K R V L E S A M N L P G V R T A L T V Q Q R A R L G R K V V E P T L H E R A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G S S T T
T S T T S S S
S T S T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence V Y L L L A D V L A R Q S K I P D A P E A K K Y I Q D A I R E F E G T S E E V R V T V A D C E L A I A R G D V E G A L K K L R R I P K E S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T S S S S S
S
S S T
T
S S S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence H Y V K A R M A M A D I Y L R H R K D K A A Y I K C Y M D L V D H T P D Y D S Y C M L G E A F M Q I Q E P E K A V R A F E S A L E F S P K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V D L I T R C A R A L V T S H D Y Q R A I D Y Y T K A I A N A R G G A Q H A L Q L E L G N L L V R L R Q Y P A A T A A I N K A L E R N R D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S S S S
S T T
T S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L P A T E N L Q L D V E A W S M L A K V H K G K L E M E G Y S Q A Q S R A L E L Q K Q L L L K L R G E L P E A V A L Q R E R T A A I C F D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
S S S S S T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence A E Q S K R A R Q F D R A M E L Y M E A L R H H D T H V P S M L A V A K L H L A N G D T D A C Q A Q C V T L L K H D P D N E E A S I M L A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T T
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence L M F H K E H Y D T A I Y H F Q Q L L E R S P N H Y G A L A Q L I L L L R R A G R L E D V P R Y F A L A E A G S P K A V M D P G Y H Y C K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T
T T T
S T T S
T T
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence I Y N R Y I N N P R E A L K E L N L A R K D T R W G S Q A I L H M V E I Y L N P D N D A V W E E K E N A D T P E S R Q A V A T A R S L L K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
T T
S S T T T
S S
T T
G G G G T T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence V R G A D T T T Q R Y R V L E S Y A I M A G K D K N E I E A S L N V L L D L A N Q D P N N V P V L L A M A T G F M M L K Q T P K A R N Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
T T
T T
T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence R V Q K I Q Y K P D E A E E F E R S W L L L A D I H I Q G G K Y D L A Q D L C Q K C L K Y N K S C A K A W E I M G Q I M E R E Q A Y K D A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T S T
T T S
S
T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . .

Sequence D H Y E N A W K H E N Q A S A Q V G F K L A F N Y L K A R R Y V E A V D V C H K V I K A F P D Y P K I R K E I L E K A R M G L K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S T
T T
S S
T T
T T T T T S S T T T S S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	D	R	V	L	A	L	V	H	Y	Y	A	R	E	G	Y	F	R	H	V	Q	T	V	C	N	E	V	L	K	K	R	P	G	D	G	V	L	T	F	W	R	A	Y	G	L	L	M	E	G	N	T	A	D	A	M	R	D	L	S	S	I	Q	G	N	S	D	L	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T											T	T	T	T																S	S	S														T	T	T		S	T						T	T	T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	A	A	A	Q	L	L	G	H	E	S	A	K	V	P	D	H	D	A	I	I	D	L	Q	A	K	L	E	I	E	E	R	T	A	S	D	Q	P	C	L	H	L	A	S	F	Y	L	Y	T	K	S	K	E	R	A	R	G	L	V	E	R	V	L	R	N	Q	P	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		S	S																		T	T	S												T	T	S	T	T	T	T											T	T	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	P	A	Q	V	L	L	G	W	I	I	I	S	Q	Q	Q	D	D	E	Y	D	M	L	F	D	E	S	E	L	D	D	A	L	S	H	F	E	Q	A	V	E	H	D	H	N	D	L	Q	A	L	L	G	K	A	K	I	M	E	L	K	K	Q	L	G	P	C	L	D	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	T	T	T		S	S			S																		T	T		S													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	E	I	N	V	R	F	G	W	F	V	P	A	L	V	E	K	T	R	M	L	M	M	L	G	D	W	E	Q	V	T	E	T	L	Q	R	V	L	A	A	D	Q	Q	N	I	M	A	Q	A	W	N	C	M	I	S	L	T	R	E	G	N	N	K	Q	A	A	K	Q	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		S	S							T	T	T	T	S	S	T	T	S	S		S															T	T													T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	L	F	S	S	M	N	R	Q	E	P	K	N	A	E	L	F	F	R	V	A	R	P	F	G	R	L	A	C	S	D	P	T	L	L	G	I	T	Y	L	M	A	D	R	A	A	Q	L	R	P	E	M	A	A	Y	V	V	E	A	A	A	Q	K	L	M	M	D	E	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S		S											T	T	T	T	T				S		G	G	G													T	T					S												T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	A	T	E	R	F	T	Q	A	L	Q	L	D	E	L	N	L	E	A	N	A	G	A	L	E	A	Q	I	M	A	G	E	L	E	E	A	A	G	Q	I	M	F	L	E	D	M	F	T	N	A	A	A	A	P	T	L	L	Y	L	K	G	L	L	A	W	K	Q	G	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		S		S	S										T	T	T	T		S	S	T	T	S	S																														S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	E	G	L	G	L	L	E	R	S	I	A	A	L	F	S	A	A	A	D	F	H	G	P	S	L	E	L	Y	A	A	L	N	P	A	R	I	T	A	V	V	R	L	L	L	Q	S	I	G	G	E	P	R	A	P	T	E	A	P	S	P	L	I	S	K	V	T	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T		S	S	S								T													G	G	G	T	T	T	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	L	L	N	K	Q	A	P	A	L	Q	E	S	A	L	L	H	A	R	A	L	Y	L	N	G	N	L	D	G	A	L	R	K	A	G	E	I	L	R	M	N	P	E	E	S	S	A	H	L	L	I	C	S	V	Y	V	A	Q	D	K	P	E	L	A	V	S	A	L	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T														T	T	T																S	S																T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	V	S	S	N	F	A	I	R	E	T	P	L	Y	H	V	V	Q	A	K	V	L	V	A	N	N	K	L	D	D	A	K	R	V	L	E	S	A	M	N	L	P	G	V	R	T	A	L	T	V	Q	Q	R	A	R	L	G	R	K	V	V	E	P	T	L	H	E	R	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G	S	S														T	T														T	S	T	T	S	S	S				S	T						S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	Y	L	L	L	A	D	V	L	A	R	Q	S	K	I	P	D	A	P	E	A	K	K	Y	I	Q	D	A	I	R	E	F	E	G	T	S	E	E	V	R	V	T	V	A	D	C	E	L	A	I	A	R	G	D	V	E	G	A	L	K	K	L	R	R	I	P	K	E	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	S	S															T	T	S	S	S	S	S		S		S	S											T											T			S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	H	Y	V	K	A	R	M	A	M	A	D	I	Y	L	R	H	R	K	D	K	A	A	Y	I	K	C	Y	M	D	L	V	D	H	T	P	D	Y	D	S	Y	C	M	L	G	E	A	F	M	Q	I	Q	E	P	E	K	A	V	R	A	F	E	S	A	L	E	F	S	P	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														T	T	S																																	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	D	L	I	T	R	C	A	R	A	L	V	T	S	H	D	Y	Q	R	A	I	D	Y	Y	T	K	A	I	A	N	A	R	G	G	A	Q	H	A	L	Q	L	E	L	G	N	L	L	V	R	L	R	Q	Y	P	A	A	T	A	A	I	N	K	A	L	E	R	N	R	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T										T	T	S			S	S	S	S		S															T	T													T	S				S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	P	A	T	E	N	L	Q	L	D	V	E	A	W	S	M	L	A	K	V	H	K	G	K	L	E	M	E	G	Y	S	Q	A	Q	S	R	A	L	E	L	Q	K	Q	L	L	L	K	L	R	G	E	L	P	E	A	V	A	L	Q	R	E	R	T	A	A	I	C	F	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T																				T	T																							S	S	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	E	Q	S	K	R	A	R	Q	F	D	R	A	M	E	L	Y	M	E	A	L	R	H	H	D	T	H	V	P	S	M	L	A	V	A	K	L	H	L	A	N	G	D	T	D	A	C	Q	A	Q	C	V	T	L	L	K	H	D	P	D	N	E	E	A	S	I	M	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T																	S	S														T	T	T																	S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	L	M	F	H	K	E	H	Y	D	T	A	I	Y	H	F	Q	Q	L	L	E	R	S	P	N	H	Y	G	A	L	A	Q	L	I	L	L	L	R	R	A	G	R	L	E	D	V	P	R	Y	F	A	L	A	E	A	G	S	P	K	A	V	M	D	P	G	Y	H	Y	C	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																S	T	T														T	T	T			S										T	T	S		T	T		T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	I	Y	N	R	Y	I	N	N	P	R	E	A	L	K	E	L	N	L	A	R	K	D	T	R	W	G	S	Q	A	I	L	H	M	V	E	I	Y	L	N	P	D	N	D	A	V	W	E	E	K	E	N	A	D	T	P	E	S	R	Q	A	V	A	T	A	R	S	L	L	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											T		T	T		S	S												T	T	T		S	S							T	T						G	G	G	G	T										T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	V	R	G	A	D	T	T	T	Q	R	Y	R	V	L	E	S	Y	A	I	M	A	G	K	D	K	N	E	I	E	A	S	L	N	V	L	L	D	L	A	N	Q	D	P	N	N	V	P	V	L	L	A	M	A	T	G	F	M	M	L	K	Q	T	P	K	A	R	N	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S														T	T																		T	T		T	T															T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	R	V	Q	K	I	Q	Y	K	P	D	E	A	E	E	F	E	R	S	W	L	L	L	A	D	I	H	I	Q	G	G	K	Y	D	L	A	Q	D	L	C	Q	K	C	L	K	Y	N	K	S	C	A	K	A	W	E	I	M	G	Q	I	M	E	R	E	Q	A	Y	K	D	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	S				T	T	S																			T													T	T	S		S																T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.
Sequence	D	H	Y	E	N	A	W	K	H	E	N	Q	A	S	A	Q	V	G	F	K	L	A	F	N	Y	L	K	A	R	R	Y	V	E	A	V	D	V	C	H	K	V	I	K	A	F	P	D	Y	P	K	I	R	K	E	I	L	E	K	A	R	M	G	L	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S			S													T			T	T		S	S											T	T		T	T	T	T	T	S	S	T	T	T	S	S	S		S