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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bdaC_

Fold library idPDB HeaderMoleculeTitle
c8bdaC_20.70PDB header: protein transportChain: C: PDB Molecule: intraflagellar transport protein 121;


Added to library: Sat Jan 14 10:05:46 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFIYLSKKIAIPNNVKLRCISWNTDQGWIACGGESGLLKVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTL
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Known secondary structure (DSSP)



GGG





TTT


STTB






TTT

S







 .........80.........90.........100.........110.........120.........130.........140
Sequence EGHNGAVICVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDG
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Known secondary structure (DSSP) BS
SS




TTT


SS
TT

SS


B

B
SSSS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVIVGSVDGNRLWGKELGMDLALVEWSPDGRLLLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKII
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Known secondary structure (DSSP)
TT


SS


B



SS
SS
TTS

TT




TTTTTSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence GVEWYDGVEGYAEPNCPVLAICLDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSA
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Known secondary structure (DSSP)


SS

SSTT


SSSSSTT
SS




S



TTS




TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VADGRELWMVQFYNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVY
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Known secondary structure (DSSP) SSS




SS




S




SSSS

SSS



TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AFNRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCVLATKGENPGEHILILCNAIGSPVDSKYIE
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Known secondary structure (DSSP)

TT

S
TTTTB

TTTT
SSSSS
TT



S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VEPKYLAITNYHVIAANDEVVYVWQFRTSFSKVLSTDINAVKRKDVREKMFSVDDSNPALSDRSPESFRN
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Known secondary structure (DSSP) S

SS

SS
SSSS
SS
SS


STTS
S
SSSS
SS


TTSS


GGG
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence MTTQTTDPIACVTACDSVLMIGRASGVVNRYSLPHLTLDAQHVLRCRPQMLALNCNLSKMSIIDINGVLT
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Known secondary structure (DSSP)
SS

S

TTTT
BSSS


SS


SSSSTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence FFDLTAKAPGGGANTMGEHLSFERKDAWDMRWADDNPELFAMMEKTRMYIFRGLDPEEPVTSSAYLCSFH
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Known secondary structure (DSSP) S



TTSSSS


B

S
TT

B

BBSS
TT
BB
B
SS


BBSSSSB






S


 .........640.........650.........660.........670.........680.........690.........700
Sequence DLEITAAFLDDIMQQPDQPDLEFMVMYETRSLRDTRELLKSASVDDAYAFVDSNSHPRLWRNLAEHALEQ
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Known secondary structure (DSSP) TT


SSSS

TTS


SSSTTS
STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence LDFTTADKAFVRCADYQGIQFVKHLGKLDDKAKQRAEVAVYFKRFDEAEQLYMRMDRPDLAIDMRMRLGD
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Known secondary structure (DSSP) T
TTSS

TT
S
TT
TTTTSS
SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence WFKVERLIRESSGDDAQLLNAHNKIGQYYSDRHKWGKAAQYYAQAKNSEMLVECFYALEDFVALGRLMDA
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Known secondary structure (DSSP) S
SSTTT
TT
STTTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence LPDGSPLLANIGEKFQSVGLCNEGVTAFLKAGDTKRAIDCCVLLNQWDQAVQLAQAHNFPQIEQLLAKYA
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Known secondary structure (DSSP) S
TTSTT
SSTT
TT
TT


 .........920.........930.........940.........950.........960.........970.........980
Sequence NHLLEKEKVMDAIELYRKANHSMEAARLLQDLAKKCADQKVHPLRVKKLYVLAALEIEKFKKRTLSGEAG
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Known secondary structure (DSSP) TT
TT
SS



S


SSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VDSAWRGAEAYHFWLLAHRQLYAGNVDLAMRTALHLREYEDLLDPVEIYSFLALAAFYNQFFGQCSKAFI
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Known secondary structure (DSSP) STTSSTTTT
STTTTTTTS
TTTT
 .........1060.........1070....
Sequence KLESMPSIPNDKRESFADLAMSIF
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Known secondary structure (DSSP) TTSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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