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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bd7V_

Fold library idPDB HeaderMoleculeTitle
c8bd7V_9.90PDB header: protein transportChain: V: PDB Molecule: intraflagellar transport protein 172;


Added to library: Sat Jan 14 10:28:35 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MQLRYFKSILPPADQYQKITSLTWAPNNSRLAAVSTDKVVYLFDENGEKRDKFKTKAAEANNPNTYIIRA
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SS







B
TTSS

TTS
TT






S
TTS
S





 .........80.........90.........100.........110.........120.........130.........140
Sequence MAFSPDSTKLAIAQSDNIVFIYRLVDPDTGAEKKSICNKFPQACAVTSLVWPKDRPNEVVFGLADGKVRL
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Known secondary structure (DSSP)

TTS

SSS


TTS

S



SS





SS
TT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GMLKNNKSYTCYAHPENSYVVALASSLNGQNVISGHMDGAIWKFNFPAEEGGTPTSSQLVVHSCVPYSLG
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Known secondary structure (DSSP) TTTT

SS





SSS

TT



TT





SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence WGSCIAAAGNDNRVVFYDLNGREIRSFDYSNNDEVREFTTCAFNPSGDTVVFGTYNRFYMYTFNIQRNDW
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Known secondary structure (DSSP) SSS

TT

SS



S
SS





SSSSTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEAGHKQIDNFYAVSAASWKPDGSKMTVGSMTGAVDMYDACVKRHMYKGKFEFTYVSKSAVIVKTLKTGM
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Known secondary structure (DSSP)
SS



S

TTS


TTS




TTTSSSSTTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence RIVLKSVYGYEIEKINIYHDRYLIARTTYTLLMGDLDTCKLSEIPWDSDGSEKFHFENERVCMVHYAGEL
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Known secondary structure (DSSP)
TT


TTTSS
TTT





SS



TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence HIVEYGRNDVLGTCRTEHMNPYLISAVVQEARGIASESKKLAYLIDLQTVRIQDLMAPVGSTLATVNHDT
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Known secondary structure (DSSP) SSSSS







SGGGS




TTS

SSSS

SSSS


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KVDWLELNQRGTHLLFRDKKRHLHLFSLSGQERTTLLNYCQYVQWVPGSDVIVAQSRNNLCVWYSVNKPD
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Known secondary structure (DSSP)




TT



TT

TTT

SS
S

TTSS

SSSSTT
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence NVTMFPIKGEVVDIERHNHRTEVIVDEGINTVSYALDEALIYFGAALEDQDYERAVQTLEPLELTPETEA
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Known secondary structure (DSSP) S

SS
SS

SSS

T
TSS

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QWMQLAEQALATNQLVIAERCYAALGDIAKSRFLHKVVKKAQQAAKEFGGDGTDAWSVRAMMAQLNKQWP
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Known secondary structure (DSSP) SS
T


SS
SS
S
ST

SSSSSTTT
STTSSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VSESLLLAQGKVDDAITLYQDNHRWEDAIRVADSTHHANAAALKQQYLTWLLETGQEEQAGAVKEREGDY
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Known secondary structure (DSSP) T
STSSSSTTT

SS
SS
TS
TTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LAAIGLYLKGGLPGRAAQVVMSVHNVNWDPALLDSILASLAKAGLYERAGELYEHMSRSSEAMQSYRRGH
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Known secondary structure (DSSP) TTT
S

SS


TTS
TT

STTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence AYRKAIDLARREFPAEVIIIEEEWGDWLVTQKQMDAAINHFIESGATLKAIKAAIDCRQFAKAAGIIEVL
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Known secondary structure (DSSP)
TTT
SSS

TT
TTT


TTT
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence DPREAMPYFRRIAQHYETTGALEEAERYYIRADMARDAVEMYSRAGKWEAAQRVARGYLTESEMRAFYRA
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Known secondary structure (DSSP)
SSS
T
TT
TTTT
S
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KAAEFEAAHKLKEAEKAYLAAGGDDVDKAIAMYKRNKMYDQMIRLVTQYRKEKVPEAHTLIAQQLEVEGN
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Known secondary structure (DSSP) TT
SSSS

TTGGG


TTT
STTGGGS
 .........1060.........1070.........1080.........1090.........1100....
Sequence LREAEKHFVEAKDWKSAVQMYRQVNQWEDALRVAKVYGGVNASKQVAYAWALTL
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Known secondary structure (DSSP) TT
T
TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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