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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bd7O_

Fold library idPDB HeaderMoleculeTitle
c8bd7O_9.90PDB header: protein transportChain: O: PDB Molecule: intraflagellar transport protein 56;


Added to library: Sat Jan 14 10:28:56 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFYSKSRPQHAARTNVAQAAANEKPKVPELEEFLTKRDYLGAIALLSFRRHANRNDLKNLEWLAYCYFHY
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Known secondary structure (DSSP)
TTTT




SS

TT
S
TT
SSS

S
TTT





TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GEHDKALVIYKELLQHEDPDPMFFVYSAACLYYMGMYKEAEEQALQGPKCALQTRILFHSAQRQGNDDKL
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Known secondary structure (DSSP) S

SSSS

T

S
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence MAYHGQLTDSIEDQLTLASIHYQRSHFQEATDIYKRLLLEHRDYLRSTVVYVALCYCKLDYYDVSLEILG
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Known secondary structure (DSSP) S



GGG

STTSSSS
SSS

TTSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VYLSAFPDSAIAVNLKACNHFRMYNGKAAEAELKTLAELSGGQHLDHDLIRHNLVVFRGGENALQVLPPL
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Known secondary structure (DSSP) SS

S
TS


SSTT

S
S
SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SDIPPEARLNLVIHHLRHHEVGEAFGLIKDMEPSTPPEFILKAVVHAMLGQVKGDPEHLKKAQQYYQLVG
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Known secondary structure (DSSP) SSTTTT

TTS


SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ASASECDTIPGRQCMASCFFLLKQFEDVLVFLSSIKTYFLNDDDFNWNLGIAKAATGKYKEAEETLLQIA
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Known secondary structure (DSSP) TSSSSSSSTTTT

TTT
SS



STT

TTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence NDKYRNEYTYTSWLARCYIMNGKARLAWERYLQLETNDESYQLLLLIANDCYKMGAFYFACKAFDVLERL
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Known secondary structure (DSSP)
S
TTTT

TS


TTTTT
TT
 .........500.........510.........520.........530.........540.........550.....
Sequence DPAPEYLEGKKGAACGAFQMIVAGKEPKDLLRDVISLLRGNNSADQCEPIVAVMRKWAKNNGVKL
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Known secondary structure (DSSP)


TTT
S
S
S
GGG
T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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