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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8bd7I_

Fold library idPDB HeaderMoleculeTitle
c8bd7I_9.90PDB header: protein transportChain: I: PDB Molecule: intraflagellar transport protein 80;


Added to library: Sat Jan 14 10:22:09 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRLKVKQSSANVHSELTAAVGWNVWNELFTCSDDQTIHKWNMLGEPEQKVSTLDAYFTDMHWYPVSSKKT
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Known secondary structure (DSSP)

SS
SS
S


B



TT


TT

TTS

SS






TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAGGTDVFAVACTDGSVKILSRTGRVEKSIEGHKGACISLRWSYDGTALATAGEDGSVKIWSRNGMLRST
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Known secondary structure (DSSP) TT

TT

SSSTTS

SSS




SSSS

SS
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAQADSPVYSIVWAYDCDQLCYCTGSNVVIKSLSSNAKQNAWKAHDGVVLKVDWSPINHLIITGGEDCKY
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Known secondary structure (DSSP)
SS





SS
STTSSSSS
SSSS

S


SSS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVWDSFGRLLFQSGLFDYPVTSVAWAPSGELFAVGGFNTLQLCDRMGWAYSKIHLNDTGSIMTLSWTADS
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Known secondary structure (DSSP) TTS

SS


TTTT
BSBSS


SS

BB





TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQLAGGGGSGGVVFGQVVDLALEDGKMQVTVVDDMRIVVNDILNENADELPEFRDRVIKVSLGYGYLIVA
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Known secondary structure (DSSP) SBSSS

TT

SSS
SSS





SS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TATQCHVYNTTNLGTPHIFDLKDTVTLLLQAERHFLLLDNSAGIQIYTYEGRQICNPRFQGLRTELLNAQ
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Known secondary structure (DSSP) SS

SS
TT


B


SS



SSTTT

TTS




TT

SSS

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence MITLSNDTIAVLDQQASGTTVRFFDTAQGRPVGEPWQHTLEVKEIALSQAGTINDRQLIVIDRNRDLYLL
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Known secondary structure (DSSP) TS
B
SS
B

TTTTS


TTT




SS





SSSSTT

TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PVMKRHVAKLAAMCDSARWHDSTAMLSAMVDQRLCVWYYPSEVYVDKDLLAKTRYTKSDSDFGKSAQIQL
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Known secondary structure (DSSP) TTT


SS
SSS

TTBS
GGGGGTTTTT



TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FAGNRCLVRRSDGVLVSAATSPYPAVLYDMIRKQQWDKATRLCRFIKDPTMWATLAAMAMAAKELNTAEV
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Known secondary structure (DSSP) TT
TT




TT


T

T
SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence AFAAIDEVDKTHFVRKVKQIPTEEGRNAELAVYRRKPEEGESILLQAGLVFRAIKLNIKLFNWERALDLA
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Known secondary structure (DSSP) T
TTTTTTTSS

SSTTTTSSSSTT
SSTTSS
 .........710.........720.........730.........740.........750.........760.....
Sequence TQHKQHQDTVLWYRQQFLKNAKLAESITRFMQMNESVVVDQAAVKKKIEEERIKESQRPGAKRYV
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Known secondary structure (DSSP)
SS





S


SSSSTTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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