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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8b9zP_

Fold library idPDB HeaderMoleculeTitle
c8b9zP_3.28PDB header: oxidoreductaseChain: P: PDB Molecule: nadh dehydrogenase (ubiquinone) 39 kda subunit, isoform a;


Added to library: Sat Jan 21 13:29:57 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRPLKTTNPAAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGD
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Known secondary structure (DSSP)



S


GGGS
BSSSSTTSB
S
TTTST
SS
GGGGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERFIHLSS
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Known secondary structure (DSSP) TTS

TT
SS
S



SS

SS

TTT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWH
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Known secondary structure (DSSP) TT

SS


SSSTTTTSTT

SSSS
SSTTTTTSTTTSSTTGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRW
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Known secondary structure (DSSP) GGTT



STTTT


S

TT

TTTT

TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPWELRPYRAALY
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Known secondary structure (DSSP)
S
SSS
GGG
SS




SSS
BGGGGT




SGGG
SSTT
 .........360.........370.......
Sequence YDAELGEFETPSPPKCIEARDELRLFA
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Known secondary structure (DSSP) S


TTSS









T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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