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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8b71B_

Fold library idPDB HeaderMoleculeTitle
c8b71B_3.80PDB header: membrane proteinChain: B: PDB Molecule: apc family permease;


Added to library: Sat Jan 21 12:58:17 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAMLSSDALSSVAYGTEQILIILATISAAAFWYSIPIAVGVLILLLALILSYRQIIYAYPQGGGAYIVSK
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Known secondary structure (DSSP)
TTTT
GGGGGG
TT

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ENLGEKPGLIAGGSLLVDYILTVAVSISAGTDAITSAFPALHDYHVPIAIFLVLVIMILNLRGASILAYP
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Known secondary structure (DSSP) TT
SGGGGGS


GGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VYLFVVALLVLIAVGLFKLMLFLLLKAFSSGCSALTGVEAISNAIPAFKNPPARNAARTLAMMGILLAIL
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Known secondary structure (DSSP)

TT

TTSGGGS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FSGITVLAYGYGTAPKPDETVVSQIASETFGRNVFYYVIQGVTSLILVLAANTGFSAFPQLAFNLARDQY
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Known secondary structure (DSSP) T



TTS
TT
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence MPRMFTVRGDRLGFSNGIIFLGFASIVLIILFGGQTEHLIPLYAVGVFIPFTLSQTGMCMKWIKQKPKGW
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Known secondary structure (DSSP) S
GGGS
TTTTSSSSTT
S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IGKMLINSCGALISFMVLSILFVTKFNVVWPVLIFMPIVVLLFFAIKNHYTAVGEQLRIVDKEPEEIKGT
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Known secondary structure (DSSP) SS









 .........430.........440.........450.........460.........470.........480.........490
Sequence VVIVPVAGVTTVVQKSIHYAKSLSDQVIAVHVSFDREQEKKFEKRWEELNNGVRLVTLHSSYRSLVHPFD
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Known secondary structure (DSSP)
SS
S
S
S
S





SSS
SS
 .........500.........510.........520.........530.........540.........550..
Sequence KFLETVEAKAKKEQFSVMVLFPQFITKKRWHTILHNQSAFLLRVRLFWKKDIMVATLPYHFK
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Known secondary structure (DSSP) TT




B
TTSSTTTTTTTTSTTTT




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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