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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8b4oB_

Fold library idPDB HeaderMoleculeTitle
c8b4oB_2.00PDB header: oxidoreductaseChain: B: PDB Molecule: cytochrome bd-type quinol oxidase subunit ii;


Added to library: Sat Dec 31 10:54:08 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MDHNTFWFILIAFLFSGYFLLEGFDFGVGILAPIIGKDSAARNTVIRTIGPVWDGNEVWLIVAGGALFAA
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Known secondary structure (DSSP)



SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FPEWYATMFSGMYLPLFLVLVSLIIRVVGLEWRKKVDDPRWQKWSDRAIFIGSWTPPLMWGFIFANILRG
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Known secondary structure (DSSP)
TGGGS



 .........150.........160.........170.........180.........190.........200.........210
Sequence MPIKADHTIDAAAALPGMVNVFAILGALAFTALFALHGLAFIRLKTAGRVRTDAAKAAPGVALLAAVTGG
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Known secondary structure (DSSP) B
B
TTS
B
SSSSSB
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PFVLWAAIAYGRSWSWILAVLIIAAVLGGAFALIKDRDGLSFLSTSVAVIGVVALLFSSLFPNVMPTTLA
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Known secondary structure (DSSP) S
TTTT
TTTT
BS
S
 .........290.........300.........310.........320.........330
Sequence DGVSLDIWNASASHYALTILTWTAAVIAPLVVLYQGWTYWVFRKRLHAEP
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Known secondary structure (DSSP) SS

TTTS


T
S
B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
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Michael Sternberg

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