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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8b3bG_

Fold library idPDB HeaderMoleculeTitle
c8b3bG_1.95PDB header: membrane proteinChain: G: PDB Molecule: variant surface glycoprotein 531;


Added to library: Sat Jan 28 08:52:30 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNGAGLLQTVWGPVCELTSELDGQAGAALKKEQEMLAKINDMQMAQLRAAIYLAKNPSTPHQNALAVLTA
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Known secondary structure (DSSP)




B
T
TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YYAERAGSGKAYFLHALPKAVDSIRRAAYLKGHLDEYLNLLEKSSGGNNKCLVTTDDATVATRGGDQKLA
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Known secondary structure (DSSP) STTSBBSSSTT
B

B
SSS
BT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKNCKLSLSPLKPVDAALTYITKAGVGKLRYDDGGAGGNAVTPSKSGVHACKLLIAHNTAGYGDGGGVTA
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Known secondary structure (DSSP) TB



S




S





STT
S


S
BSSSS
SSS



SS
B
GGGBSSTTTSS
SSS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIDVFAGYMKVKATDAEPKLAAKSDLEEGGGGGAEAWKALHTAIKQEADAEAAELTNETGKLGERRHFLA
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Known secondary structure (DSSP)
GGGTBSSSS



GGGGSTT

SS
T


TT
GGGS


S
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence AATNVLAGRAAVEAAFGSDSEGGDRKIIELIEKELIVKGTANRDADESLGNIKTLKELGELLSYFQLKNS
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Known secondary structure (DSSP)

T

STTTT

TTGGG
SS
GGG


 .........360...
Sequence NTINELRNKLKAV
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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