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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8aswA_

Fold library idPDB HeaderMoleculeTitle
c8aswA_3.96PDB header: translationChain: A: PDB Molecule: elongator complex protein 1;


Added to library: Sat Dec 10 09:25:13 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRNLITLNKGKFKPTASTAEGDEDDLSFTLLDSVFDTLSDSITCVLGSTDIGAIEVQQFMKDGSRNVLAS
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Known secondary structure (DSSP)









SSS

S





TTTT
TTT


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FNIQTFDDKLLSFVHFADINQLVFVFEQGDIITATYDPVSLDPAETLIEIMGTIDNGIAAAQWSYDEETL
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Known secondary structure (DSSP)

SS
SS
TTTTTTS


SS

STTSS



TT

TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMVTKDRNVVVLSKLFEPISEYHLEVDDLKISKHVDPTMPYMVDTGDVTALDSHEITISWRGDCDYFAVS
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Known secondary structure (DSSP) TTSTT



STGGGTS





SS






SS





TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SVEEVPDEDDETKSIKRRAFRVFSREGQLDSASEPVTGMEHQLSWKPQGSLIASIQRKTDLGEEDSVDVI
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Known secondary structure (DSSP)

STTTTS
TTS






S


TTS




SSTT



 .........290.........300.........310.........320.........330.........340.........350
Sequence FFERNGLRHGEFDTRLPLDEKVESVCWNSNSEALAVVLANRIQLWTSKNYHWYLKQELYASDISYVKWHP
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Known secondary structure (DSSP)
TT






TT


TTSS
SS
SSS


S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence EKDFTLMFSDAGFINIVDFAYKMAQGPTLEPFDNGTSLVVDGRTVNITPLALANVPPPMYYRDFETPGNV
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Known secondary structure (DSSP) SSSSTT






STT


TTTTT



TTS
SS

SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence LDVACSFSNEIYAAINKDVLIFAAVPSIEEMKKGKHPSIVCEFPKSEFTSEVDSLRQVAFINDSIVGVLL
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Known secondary structure (DSSP)


TTSSTT
S
T



SS
STTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DTDNLSRIALLDIQDITQPTLITIVEVYDKIVLLRSDFDYNHLVYETRDGTVCQLDAEGQLMEITKFPQL
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Known secondary structure (DSSP)
SSS
SSTTS
SS

SSSSSTTS
SS




SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence VRDFRVKRVHNTSAEDDDNWSAESSELVAFGITNNGKLFANQVLLASAVTSLEITDSFLLFTTAQHNLQF
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Known secondary structure (DSSP)
S



SS






SS
SS
S


TT
SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence VHLNSTDFKPLPLVEEGVEDERVRAIERGSILVSVIPSKSSVVLQATRGNLETIYPRIMVLAEVRKNIMA
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Known secondary structure (DSSP) S

SS







TT


SS

TT
TTTT
TTS


 .........710.........720.........730.........740.........750.........760.........770
Sequence KRYKEAFIVCRTHRINLDILHDYAPELFIENLEVFINQIGRVDYLNLFISCLSEDDVTKTKYKETLYSGI
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Known secondary structure (DSSP) T
SST


STSST


TTSS


SS
SSSSSS


SSS
T
 .........780.........790.........800.........810.........820.........830.........840
Sequence SKSFGMEPAPLTEMQIYMKKKMFDPKTSKVNKICDAVLNVLLSNPEYKKKYLQTIITAYASQNPQNLSAA
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Known secondary structure (DSSP) TS









TTT

TTT
SSTSTT

 .........850.........860.........870.........880.........890.........900.........910
Sequence LKLISELENSEEKDSCVTYLCFLQDVNVVYKSALSLYDVSLALLVAQKSQMDPREYLPFLQELQDNEPLR
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Known secondary structure (DSSP) S

SSS
TT
STTS


TS
 .........920.........930.........940.........950.........960.........970.........980
Sequence RKFLIDDYLGNYEKALEHLSEIDKDGNVSEEVIDYVESHDLYKHGLALYRYDSEKQNVIYNIYAKHLSSN
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Known secondary structure (DSSP) TT
GGG

SSS

ST

SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QMYTDAAVAYEMLGKLKEAMGAYQSAKRWREAMSIAVQKFPEEVESVAEELISSLTFEHRYVDAADIQLE
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Known secondary structure (DSSP) S
S

TT

SSST
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence YLDNVKEAVALYCKAYRYDIASLVAIKAKKDELLEEVVDPGLGEGFGIIAELLADCKGQINSQLRRLREL
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Known secondary structure (DSSP) TT

TT

TT
STTS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RAKKEENPYAFYGQETEQADDVSVAPSETSTQESFFTRYTGKTGGTAKTGASRRTAKNKRREERKRARGK
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Known secondary structure (DSSP)
SS

SS
TTTT
TTT




S






TTT




SS

TT
SS





SS



TTTT

SS

S
 .........1200.........1210.........1220.........1230.........1240.........1250.....
Sequence KGTIYEEEYLVQSVGRLIERLNQTKPDAVRVVEGLCRRNMREQAHQIQKNFVEVLDLLKANVKEI
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Known secondary structure (DSSP) SSTT

S

SSSSSTT
SS

TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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