Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8arpC_

Fold library idPDB HeaderMoleculeTitle
c8arpC_3.05PDB header: hydrolaseChain: C: PDB Molecule: atp-dependent rna helicase dbp2;


Added to library: Sat Mar 25 12:20:09 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YNQPQELIKPNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFP
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)










GGGS




B




GGGS
S
SSTT
SSS





SSTTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence DYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLV
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TT

S

TBT



TTS
TTTS


TTT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
SSTT
TTTT


SSS
TTTTT

S
TTTS

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHN
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
STT
TTS
TTSSS

SS
SS



S
S


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDW
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) S


B

TTTTTSTT

S
STTGGGT



SSS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTS
STTTS
S







SS

SSTTS
SSS


B

GGGGGG
 .........430.........440.....
Sequence GAKLISIMREANQNIPPELLKYDRR
Predicted secondary structure






SS confidence
























Known secondary structure (DSSP) TTTT



TTTGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions