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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8aplC_

Fold library idPDB HeaderMoleculeTitle
c8aplC_4.10PDB header: viral proteinChain: C: PDB Molecule: primase d5;


Added to library: Sat Nov 12 10:55:25 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMGNKLFNIAQRILDTNSVLLTERGDYIVWINNSWKFNSEEPLITKLILSIRHQLPKEYSSELLCPRKRK
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Known secondary structure (DSSP)


STT

TTS

SSS
SSS

GGGS
TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVEANIRDMLVDSVETDTYPDKLPFKNGVLDLVDGMFYSGDDAKKYTCTVSTGFKFDDTKFVEDSPEMEE
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Known secondary structure (DSSP)

S






SS
SSSSS

TTS

S


SS


TTTS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LMNIINDIQPLTDENKKNRELYEKTLSSCLCGATKGCLTFFFGETATGKSTTKRLLKSAIGDLFVETGQT
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Known secondary structure (DSSP) S


STTTT

S

SSSSTTSSGGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILTDVLDKGPNPFIANMHLKRSVFCSELPDFACSGSKKIRSDNIKKLTEPCVIGRPCFSNKINNRNHATI
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Known secondary structure (DSSP) S
S
SSB
TT
S




SSSTT


B
TTSS

B
SSS


S


 .........290.........300.........310.........320.........330.........340.........350
Sequence IIDTNYKPVFDRIDNALMRRIAVVRFRTHFSYDKVKLLDEGLDGKIQNNRYRFAFLYLLVKWYKKYHVPI
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Known secondary structure (DSSP)
SS


BS










TTTTTTTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence MKLYPTPEEIPDFAFYLKIGTLLVSSSVKHIPLMTDLSKKGYILYDNVVTLPLTTFQQKISKYFNSRLFG
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Known secondary structure (DSSP)





GGGS


STTGGGTTTT
TTS
TTTS
 .........430.........440.........
Sequence HDIESFINRHKKFANVSDEYLQYIFIEDI
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Known secondary structure (DSSP) SSSS


GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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