PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8apgB_

Fold library id	PDB Header	Molecule	Title
c8apgB_	UNK	PDB header: Blank PDB header	PDB COMPND:

Links to external resources
Added to library: Sat Oct 29 11:29:02 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L C N A A S K V Q A R S A K K L A A L T D A G I Q K T I S E H N A N G T D A A V S S T K R Y L A E Q R Q L F H Y R V V R F F D E C H Y I I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G E Y F A Q Y T K V N L I W D L R F L T K L V V L F L I G T V L G R Q S I F P P I D P D S P L V E A L V T K V N P N Y S T V A I S V Q G L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T S S S
T T S T T T
S
T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence Y V G T G L A A I A L A G V G L G I G T I F G N L L V A C A R Q P N L T K M L F N Y A I L G F A L T E A I G L F A L M L A F L M L F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	C	N	A	A	S	K	V	Q	A	R	S	A	K	K	L	A	A	L	T	D	A	G	I	Q	K	T	I	S	E	H	N	A	N	G	T	D	A	A	V	S	S	T	K	R	Y	L	A	E	Q	R	Q	L	F	H	Y	R	V	V	R	F	F	D	E	C	H	Y	I	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T																		T																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	Y	F	A	Q	Y	T	K	V	N	L	I	W	D	L	R	F	L	T	K	L	V	V	L	F	L	I	G	T	V	L	G	R	Q	S	I	F	P	P	I	D	P	D	S	P	L	V	E	A	L	V	T	K	V	N	P	N	Y	S	T	V	A	I	S	V	Q	G	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T																													T	S	S	S					T	T	S	T	T						T		S		T	T									G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	Y	V	G	T	G	L	A	A	I	A	L	A	G	V	G	L	G	I	G	T	I	F	G	N	L	L	V	A	C	A	R	Q	P	N	L	T	K	M	L	F	N	Y	A	I	L	G	F	A	L	T	E	A	I	G	L	F	A	L	M	L	A	F	L	M	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																							G	G	G																															T