PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8apdA_

Fold library id	PDB Header	Molecule	Title
c8apdA_	UNK	PDB header: Blank PDB header	PDB COMPND:

Links to external resources
Added to library: Sat Oct 29 11:12:22 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K A A P K T L H Q V R N V A Y F F A A W L G V Q K G Y I E K S A N D R L W V E H Q R K V R Q Q N V E R Q Q A L D S I K L M Q Q G V H D L P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G F E F M E H K V V N K D I H A P H E N L E T L R L T L T R Q D E F L L R E E P V K C V T V T G T N G E Y G I Y P G H A Y K I V Q L N P S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S S S
S S
S B S S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L T V E Y T D G T T K K Y F V S G G F A H I N N E G S C D V N T V E C T L L D D L D L A I A E K E L A A Q Q A A L G S A K D D K A K S V V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S T T T S
T T T S
T
S

. . . . . .

Sequence I R I S V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	A	A	P	K	T	L	H	Q	V	R	N	V	A	Y	F	F	A	A	W	L	G	V	Q	K	G	Y	I	E	K	S	A	N	D	R	L	W	V	E	H	Q	R	K	V	R	Q	Q	N	V	E	R	Q	Q	A	L	D	S	I	K	L	M	Q	Q	G	V	H	D	L	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																																																											T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	F	E	F	M	E	H	K	V	V	N	K	D	I	H	A	P	H	E	N	L	E	T	L	R	L	T	L	T	R	Q	D	E	F	L	L	R	E	E	P	V	K	C	V	T	V	T	G	T	N	G	E	Y	G	I	Y	P	G	H	A	Y	K	I	V	Q	L	N	P	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T										S	S	S															S	S										S						B	S	S							T	T										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	V	E	Y	T	D	G	T	T	K	K	Y	F	V	S	G	G	F	A	H	I	N	N	E	G	S	C	D	V	N	T	V	E	C	T	L	L	D	D	L	D	L	A	I	A	E	K	E	L	A	A	Q	Q	A	A	L	G	S	A	K	D	D	K	A	K	S	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S								S	S							T	T	T							S					T	T	T	S																		T			S
	.	.	.	.	.	.
Sequence	I	R	I	S	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)