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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8aicB_

Fold library idPDB HeaderMoleculeTitle
c8aicB_2.80PDB header: viral proteinChain: B: PDB Molecule: envelope glycoprotein gp130;


Added to library: Sat Feb 25 08:48:09 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANW
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Known secondary structure (DSSP)


TT
SS





S
BTTS



GGG

SS


GGGGGB



S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSSKLYGKARMGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRA
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Known secondary structure (DSSP)
TTT

TTS

GGGS
SS


STTB
TT

TTS
TT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPYEWAKGGLNRLFRNISVLDVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPDHPYSC
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Known secondary structure (DSSP) S
TTTSTT


SSB



TT

S
BB
BTTGGG

TTT
GGGSS



TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RLWRYREGKEEVKCLTSDHTRCLYYPEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQE
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Known secondary structure (DSSP)

SB
B

S


SS
SSS
SB

SSTTTTTTSS



B




S

 .........290.........300.........310.........320.........330
Sequence CKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNARAFVGLIDPKFPPTYP
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Known secondary structure (DSSP)
TTTTSS
GGGS
TTT
SS

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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London
Michael Sternberg

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