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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8ag5D_

Fold library idPDB HeaderMoleculeTitle
c8ag5D_3.47PDB header: viral proteinChain: D: PDB Molecule: protein c10;


Added to library: Sat Nov 12 10:54:29 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDIYDDKGLQTIKLFNNEFDCIRNDIRELFKHVTDSDSIQLPMEDNSDIIENIRKILYRRLKNVECVDID
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Known secondary structure (DSSP)

TTS
SSSSTTTT


S
S
SS

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence STITFMKYDPNDDNKRTCSNWVPLTNNYMEYCLVIYLETPICGGKIKLYHPTGNIKSDKDIMFAKTLDFK
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Known secondary structure (DSSP) S
SS

B

S





SSSS

SSS



TT


STTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKKVLTGRKTIAVLDISVSYNRSMTTIHYNDDVDIDIHTDKNGKELCYCYITIDDHYLVDVETIGVIVNR
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Known secondary structure (DSSP)



SS




SSS
SS
SS




TTB


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGKCLLVNNHLGIGIVKDKRISDSFGDVCMDTIFDFSEARELFSLTNDDNRNIAWDTDKLDDDTDIWTPV
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Known secondary structure (DSSP) T

SSS
SGGGGT

SSSB
SS
STTT


TT


TTTSS



S







 .........290.........300.........310.........320.........330.
Sequence TEDDYKFLSRLVLYAKSQSDTVFDYYVLTGDTEPPTVFIFKVTRFYFNMPK
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Known secondary structure (DSSP) STTTS


SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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