PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8a3tA_

Fold library id	PDB Header	Molecule	Title
c8a3tA_	3.50	PDB header: cell cycle	Chain: A: PDB Molecule: anaphase-promoting complex subunit doc1;

Links to external resources
Added to library: Tue Sep 6 18:04:28 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I G I N K V L D H L A P S E L I K P V K S C H N K P S V L V L D D R I V D A A T K D L Y V N G F Q Q N P T P E N L Q H M F H Q G I E I L D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S
S S S
B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A R M I N V T H L A L W K P S S F K L G N P V D F A L D D N Y D T F W Q S D G G Q P H Q L D I M F S K R M D I C V M A I F F S M I A D E S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S S
S S
T T T T S S
S S
S S S S S S
T T T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A P S L V K V Y A G H S P S D A R F Y K M L E V R N V N G W V A L R F L D N R E D D Q L L K C Q F I R L L F P V N H E N G K D T H L R G I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S T T
S S
S
S S
T T T
S
S T T S
S

. . . . . . . . .

Sequence L Y V P S A I L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	G	I	N	K	V	L	D	H	L	A	P	S	E	L	I	K	P	V	K	S	C	H	N	K	P	S	V	L	V	L	D	D	R	I	V	D	A	A	T	K	D	L	Y	V	N	G	F	Q	Q	N	P	T	P	E	N	L	Q	H	M	F	H	Q	G	I	E	I	L	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			T	T	T		S															S	S	S									B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	R	M	I	N	V	T	H	L	A	L	W	K	P	S	S	F	K	L	G	N	P	V	D	F	A	L	D	D	N	Y	D	T	F	W	Q	S	D	G	G	Q	P	H	Q	L	D	I	M	F	S	K	R	M	D	I	C	V	M	A	I	F	F	S	M	I	A	D	E	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					T	T	S						S				S	S			T	T	T	T	S	S			S	S							S	S	S	S								S	S													T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	P	S	L	V	K	V	Y	A	G	H	S	P	S	D	A	R	F	Y	K	M	L	E	V	R	N	V	N	G	W	V	A	L	R	F	L	D	N	R	E	D	D	Q	L	L	K	C	Q	F	I	R	L	L	F	P	V	N	H	E	N	G	K	D	T	H	L	R	G	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B	S	S	S	T	T										S	S			S								S	S		T	T	T		S				S										T	T	S		S
	.	.	.	.	.	.	.	.	.
Sequence	L	Y	V	P	S	A	I	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)