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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7zu0D_

Fold library idPDB HeaderMoleculeTitle
c7zu0D_4.40PDB header: cytosolic proteinChain: D: PDB Molecule: vps33 isoform 1;


Added to library: Sat Oct 1 11:56:47 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNRFWNTKKFSLTNADGLCATLNEISQNDEVLVVQPSVLPVLNSLLTFQDLTQSTPVRKITLLDDQLSDD
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Known secondary structure (DSSP)
TTT


SS

TTT

S

STTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPSALGSVPQMDLIFLIDVRTSLRLPPQLLDAAQKHHIIYCRWKPSFQNIESQLKELSNEYTLYPWDLLP
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Known secondary structure (DSSP) S

TTTSS

TT



SS


TTGGGGT
S




 .........150.........160.........170.........180.........190.........200.........210
Sequence FPQIDENVLLTHSLYNMENVNMYYPNLRSLQSATESILVDDMVNSLQSLIFETNSIITNVVSIGNLSKRC
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Known secondary structure (DSSP)
TT


SB
TT

BSSS
SSGGGT






S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SHLLKKRIDEHQTENDLFIKGTLYGERTNCGLEMDLIILERNTDPITPLLTQLTYAGILDDLYEFNSGIK
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Known secondary structure (DSSP) TT

S
GGGSS



GGGS
TGGGS


BS


TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence IKEKDMNFNYKEDKIWNDLKFLNFGSIGPQLNKLAKELQTQLQQRQAFLKNHTTLSSDVLKVVETEEYGS
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Known secondary structure (DSSP)
SSS




TTT
TTSBT

TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FNKILELELEILMGNTLNNDIEDIILELQYQYEVDQKKILRLICLLSLCKNSLREKDYEYLRTFMIDSWG
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Known secondary structure (DSSP) TS
S
GGGTS


TTSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence IEKCFQLESLAELGFFTSKTSKSTRLQKEYRYISQWFNTVPATFAYSGVVPLTMRLVQMLYDRSILFHNY
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Known secondary structure (DSSP) TTTTSS










S
S
S


TTTTTS


BTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SSQQPFILSREPRVSQTEDLIEQLYGDSHAIEESIWVPGTITKKINASIKSNNEDIALVVFLGGVTMGEI
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Known secondary structure (DSSP)
S

S
SB
SS


TT
S
TTS



S
GGGT

T
B
 .........570.........580.........590.......
Sequence AIMKHLQKILGKKGINKRFIIIADGLINGTRIMNSIS
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Known secondary structure (DSSP) TT



S
B

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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